Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635930

Identifier: 221635930

GI number: 221635930

Start: 515647

End: 515793

Strand: Reverse

Name: 221635930

Synonym: trd_A0523

Alternate gene names: NA

Gene position: 515793-515647 (Counterclockwise)

Preceding gene: 221635931

Following gene: 221635928

Centisome position: 56.2

GC content: 63.27

Gene sequence:

>147_bases
ATGCATCCAGCTCACCATGCCCTCCAGCGGCCTCCGCTCCTCTCGAGTCATGCCCAAAAAGGAGACGCTGACGGCATCCC
CGTGACGGCCGCCTCGCCCGGATCGGTCTTCTCAAGGGATCTTCTCCGCGAACAAGCGATCCGGTGA

Upstream 100 bases:

>100_bases
ACCTGCTCGCTTGACCTCACGTGCTGCGCTCCAATCGTACACTTTCCACGCCTGTCCCGCAGCGATCAGCACGCCACGAA
CTCGCGGAGCCTCGTCCGGC

Downstream 100 bases:

>100_bases
CTCGCTGGACTCCTCAGATGCATGCGCGCTGTCTCGCCTCAACGATGCTCGCGGGCGCTCTCCGCGTGCGTCCCCCTTCT
CCGCCAGCGTGATCCCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MHPAHHALQRPPLLSSHAQKGDADGIPVTAASPGSVFSRDLLREQAIR

Sequences:

>Translated_48_residues
MHPAHHALQRPPLLSSHAQKGDADGIPVTAASPGSVFSRDLLREQAIR
>Mature_48_residues
MHPAHHALQRPPLLSSHAQKGDADGIPVTAASPGSVFSRDLLREQAIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5138; Mature: 5138

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPAHHALQRPPLLSSHAQKGDADGIPVTAASPGSVFSRDLLREQAIR
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MHPAHHALQRPPLLSSHAQKGDADGIPVTAASPGSVFSRDLLREQAIR
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA