The gene/protein map for NC_011961 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635901

Identifier: 221635901

GI number: 221635901

Start: 485535

End: 486839

Strand: Reverse

Name: 221635901

Synonym: trd_A0495

Alternate gene names: NA

Gene position: 486839-485535 (Counterclockwise)

Preceding gene: 221635903

Following gene: 221635900

Centisome position: 53.05

GC content: 68.12

Gene sequence:

>1305_bases
ATGCGTGACCGAACGCTTCCGACCGTATCGCCGCGACGGACGACCGGCCTACTGCTCGCCTCGAGCGCTGTCCTGCTAGT
CAGCCTCATCGCCGCATCCCTGACCCGAATCGGTGTACCGTCGCGCTCGCTCCCCCATCTGGGTGCCGCACCGAACGCGA
TCGTCCGTCCCCTGGTTCTGCTCCCAGTCGGCACCACCGATGACCCGAGACTGGCCGCCCGCACGACCGGACTCGTTCTC
GTCGATGCCCGATCGGGAGCGATTCTGGACCGCCACGCGGTCGCTGACTCGACCGAGGTCTTGAGCGCCTCTTTCGTCTC
GCCTGGCGACCGCATCGTCTTCTACACCGGCGAGCACACGGGGCCGCACGCACGGCTCGAGGTCCGTCGCCTTCCTGGCT
GGGATATCGAGTCCGTTGTCACGATCGAAGCCAGTATCCCGCCAGCCCGCGTGCTCGCTGAGCGCTTCCCCTCGATCAGC
GCCTCTGACCCGACGCTCCTCGCGTTCGCAGCGGAACCGCAGGGACGGTGGGCTGCCGTCGCGTTCTGGTCGCTGATAAC
GCCCAAGCCCGACGGTCCATCCAGCCAGCTCGTGTGGGTGACCATGGTGGATCTCGAGCGTGCTGTGTGGGCGGGATGGG
CTTCCCCGCTCCCCTCGAGCCAGGCAGCTTCGCTCGTCGCCCTTCCCGACCGTATCCTGGTGCTCGGCCACGAGCTTCGG
ACCTCGAGCCGGCGCAGTGTCGGCACGGTCGTCGCGCTCGACCCGCAGAGCGGCGAAGCGCTCGGCCAGCTGACCTTGGA
GAGTGCTTCGACGACGGCCAAGCCGCTGGGAGAGGGACCGGACGACGAGCAAGCCACCTTCTCGACCGCGCTCGACCCCG
TTCTCTGGAACGGCCAACTGTTGGTGGTGACCACCGACCTGGAAGCGTTCGTCATCGACCCCAGTGCGCTCACCGTCACC
GCGCACTACCCACCGCTCGCGGACCGGCTCGTCGCCGCCGGACGACCCTTCATCACGGGAGATCGGCTGGTCGTCGGAGG
TGGTGCAGTGCGCGTGATCGATATCTCGTCGTGGCGACTGCTGGCCACCCACCCCTTGCCGCAGATGCCGGAGACCTGGT
GGATCGCCGCCGGCCTGGTCGACCAGGAGACGTTGCTCTTGACCGGCACACGCGAGGGCTGCCTGCGGCACCTGGATCTG
GCGACGAGTCGTCTCAGCGCGCCGCTCGCGTGCGGCTTCCTGGTCGACTATCCTGCCCCGCTGTTCGGCTGGCCAGTCTT
CTTCGCAGGCTCGAGCGGTCCCTGA

Upstream 100 bases:

>100_bases
AGCCTACTGCACGCGCGCACAGGTGTGGTCGCAATGCTGATCGGTCTCCTCGTACCAACCGAAACCGGATGCTCAGAGAG
CCAACGCTCGGAGGTCGACC

Downstream 100 bases:

>100_bases
AGAGACCGGTTCCAGAGAGGAGTTCTCCGATGCTCGCTCAATTTACTGGCCGCGCCGATGGCCGACCGGTCTCCCGCCCC
CTCGTCAAGCTTCTCGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRDRTLPTVSPRRTTGLLLASSAVLLVSLIAASLTRIGVPSRSLPHLGAAPNAIVRPLVLLPVGTTDDPRLAARTTGLVL
VDARSGAILDRHAVADSTEVLSASFVSPGDRIVFYTGEHTGPHARLEVRRLPGWDIESVVTIEASIPPARVLAERFPSIS
ASDPTLLAFAAEPQGRWAAVAFWSLITPKPDGPSSQLVWVTMVDLERAVWAGWASPLPSSQAASLVALPDRILVLGHELR
TSSRRSVGTVVALDPQSGEALGQLTLESASTTAKPLGEGPDDEQATFSTALDPVLWNGQLLVVTTDLEAFVIDPSALTVT
AHYPPLADRLVAAGRPFITGDRLVVGGGAVRVIDISSWRLLATHPLPQMPETWWIAAGLVDQETLLLTGTREGCLRHLDL
ATSRLSAPLACGFLVDYPAPLFGWPVFFAGSSGP

Sequences:

>Translated_434_residues
MRDRTLPTVSPRRTTGLLLASSAVLLVSLIAASLTRIGVPSRSLPHLGAAPNAIVRPLVLLPVGTTDDPRLAARTTGLVL
VDARSGAILDRHAVADSTEVLSASFVSPGDRIVFYTGEHTGPHARLEVRRLPGWDIESVVTIEASIPPARVLAERFPSIS
ASDPTLLAFAAEPQGRWAAVAFWSLITPKPDGPSSQLVWVTMVDLERAVWAGWASPLPSSQAASLVALPDRILVLGHELR
TSSRRSVGTVVALDPQSGEALGQLTLESASTTAKPLGEGPDDEQATFSTALDPVLWNGQLLVVTTDLEAFVIDPSALTVT
AHYPPLADRLVAAGRPFITGDRLVVGGGAVRVIDISSWRLLATHPLPQMPETWWIAAGLVDQETLLLTGTREGCLRHLDL
ATSRLSAPLACGFLVDYPAPLFGWPVFFAGSSGP
>Mature_434_residues
MRDRTLPTVSPRRTTGLLLASSAVLLVSLIAASLTRIGVPSRSLPHLGAAPNAIVRPLVLLPVGTTDDPRLAARTTGLVL
VDARSGAILDRHAVADSTEVLSASFVSPGDRIVFYTGEHTGPHARLEVRRLPGWDIESVVTIEASIPPARVLAERFPSIS
ASDPTLLAFAAEPQGRWAAVAFWSLITPKPDGPSSQLVWVTMVDLERAVWAGWASPLPSSQAASLVALPDRILVLGHELR
TSSRRSVGTVVALDPQSGEALGQLTLESASTTAKPLGEGPDDEQATFSTALDPVLWNGQLLVVTTDLEAFVIDPSALTVT
AHYPPLADRLVAAGRPFITGDRLVVGGGAVRVIDISSWRLLATHPLPQMPETWWIAAGLVDQETLLLTGTREGCLRHLDL
ATSRLSAPLACGFLVDYPAPLFGWPVFFAGSSGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45980; Mature: 45980

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRTLPTVSPRRTTGLLLASSAVLLVSLIAASLTRIGVPSRSLPHLGAAPNAIVRPLVL
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEE
LPVGTTDDPRLAARTTGLVLVDARSGAILDRHAVADSTEVLSASFVSPGDRIVFYTGEHT
EECCCCCCCCEEEEECCEEEEECCCCCEEEHHHCCCCHHHHEECCCCCCCEEEEEECCCC
GPHARLEVRRLPGWDIESVVTIEASIPPARVLAERFPSISASDPTLLAFAAEPQGRWAAV
CCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEE
AFWSLITPKPDGPSSQLVWVTMVDLERAVWAGWASPLPSSQAASLVALPDRILVLGHELR
EEEEEECCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEHHHC
TSSRRSVGTVVALDPQSGEALGQLTLESASTTAKPLGEGPDDEQATFSTALDPVLWNGQL
CCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCEE
LVVTTDLEAFVIDPSALTVTAHYPPLADRLVAAGRPFITGDRLVVGGGAVRVIDISSWRL
EEEEECCEEEEECCCEEEEEECCCCHHHHHHHCCCCEEECCEEEECCCEEEEEEECCCEE
LATHPLPQMPETWWIAAGLVDQETLLLTGTREGCLRHLDLATSRLSAPLACGFLVDYPAP
EEECCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
LFGWPVFFAGSSGP
HHCCEEEEECCCCC
>Mature Secondary Structure
MRDRTLPTVSPRRTTGLLLASSAVLLVSLIAASLTRIGVPSRSLPHLGAAPNAIVRPLVL
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEE
LPVGTTDDPRLAARTTGLVLVDARSGAILDRHAVADSTEVLSASFVSPGDRIVFYTGEHT
EECCCCCCCCEEEEECCEEEEECCCCCEEEHHHCCCCHHHHEECCCCCCCEEEEEECCCC
GPHARLEVRRLPGWDIESVVTIEASIPPARVLAERFPSISASDPTLLAFAAEPQGRWAAV
CCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEE
AFWSLITPKPDGPSSQLVWVTMVDLERAVWAGWASPLPSSQAASLVALPDRILVLGHELR
EEEEEECCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEHHHC
TSSRRSVGTVVALDPQSGEALGQLTLESASTTAKPLGEGPDDEQATFSTALDPVLWNGQL
CCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCEE
LVVTTDLEAFVIDPSALTVTAHYPPLADRLVAAGRPFITGDRLVVGGGAVRVIDISSWRL
EEEEECCEEEEECCCEEEEEECCCCHHHHHHHCCCCEEECCEEEECCCEEEEEEECCCEE
LATHPLPQMPETWWIAAGLVDQETLLLTGTREGCLRHLDLATSRLSAPLACGFLVDYPAP
EEECCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
LFGWPVFFAGSSGP
HHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA