| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635887
Identifier: 221635887
GI number: 221635887
Start: 471232
End: 471471
Strand: Reverse
Name: 221635887
Synonym: trd_A0481
Alternate gene names: NA
Gene position: 471471-471232 (Counterclockwise)
Preceding gene: 221635889
Following gene: 221635886
Centisome position: 51.37
GC content: 71.67
Gene sequence:
>240_bases ATGCCGGAACTCGAGCTGGACGACTATGCCCGACCGGAGACCGCGATCGCGGTCGCTGCGACCGCGCTGCTCCTCTCGCC ACGCGTCCGCCGTGCCGTCCGCCGGGGGCTGGTCTACGCCGTCGCGGGCGGGTTGACCGCCATCGCCGGCGGGCAGGCCA TTCTGCGGGGAGCACGCGACGGCTTCGTTGCGGCGCGCCAACGACTGCGACCGCAAGGGTCGATTGTCCAACCCAACTGA
Upstream 100 bases:
>100_bases TACAAAACTCTGGTGCGTCGATACGCTTTCGCACGATCACGATGACATCGGGGCTGCGCGACAGACCGACAATAGTAGTG TCGTCAGAAGGGGGGATACG
Downstream 100 bases:
>100_bases CCGGGAGAGACGCATGCACGAACAGGAACGAGACGAGCAGGCTCGAGAAGCGCGCTCGCCCGACGATGTCGCAGCAGCGG AGCACAGAGAAGCTGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPELELDDYARPETAIAVAATALLLSPRVRRAVRRGLVYAVAGGLTAIAGGQAILRGARDGFVAARQRLRPQGSIVQPN
Sequences:
>Translated_79_residues MPELELDDYARPETAIAVAATALLLSPRVRRAVRRGLVYAVAGGLTAIAGGQAILRGARDGFVAARQRLRPQGSIVQPN >Mature_78_residues PELELDDYARPETAIAVAATALLLSPRVRRAVRRGLVYAVAGGLTAIAGGQAILRGARDGFVAARQRLRPQGSIVQPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8351; Mature: 8220
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELELDDYARPETAIAVAATALLLSPRVRRAVRRGLVYAVAGGLTAIAGGQAILRGARD CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCC GFVAARQRLRPQGSIVQPN HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PELELDDYARPETAIAVAATALLLSPRVRRAVRRGLVYAVAGGLTAIAGGQAILRGARD CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCCC GFVAARQRLRPQGSIVQPN HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA