The gene/protein map for NC_011961 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

Click here to switch to the map view.

The map label for this gene is 221635886

Identifier: 221635886

GI number: 221635886

Start: 470751

End: 471218

Strand: Reverse

Name: 221635886

Synonym: trd_A0480

Alternate gene names: NA

Gene position: 471218-470751 (Counterclockwise)

Preceding gene: 221635887

Following gene: 221635885

Centisome position: 51.35

GC content: 69.66

Gene sequence:

>468_bases
ATGCACGAACAGGAACGAGACGAGCAGGCTCGAGAAGCGCGCTCGCCCGACGATGTCGCAGCAGCGGAGCACAGAGAAGC
TGAGCCGAGCGAGCGGGCATCCCCAGAGCGTGACGGACAACCGCGACGCACGCGGGTCGGCGAGCCCGGCACACCCGGGA
GTAGCGCGCGGACGCGGCGGGAGGCTCCGCGCGAACGAGCCACGGTCACCGCGGAACCGTCGACGCAGGTTGCCGAGTCG
GTGGCGCCCTCGGTTCCGCCAGCAGTCGCCCACGCTGAACAGCTGGTGGACACGGCCATTCTCTGGGCCGCCTCGCTCGG
CACAGTGGTGGGTCGCCGTCTTTTGAAGACGCTCGTGCGCACCAAGGAAGAGCTGGAGGACGTGTTGGCCGAGGCGGAAG
CGCTCCGCCAAGCGTGGCAGCGCGGGCACCAGCCAACTGATCGATCGCGCCAGTCCACGGACGCGTAG

Upstream 100 bases:

>100_bases
CAGGCCATTCTGCGGGGAGCACGCGACGGCTTCGTTGCGGCGCGCCAACGACTGCGACCGCAAGGGTCGATTGTCCAACC
CAACTGACCGGGAGAGACGC

Downstream 100 bases:

>100_bases
TCAGGATAGAGCTTCAGCGCGATGAACCGACCACGCATTCGGGTACTGCACCAGTTACCCGGCCGGGTGCGTTTGTCGCT
CGATCCGTACCCGCCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MHEQERDEQAREARSPDDVAAAEHREAEPSERASPERDGQPRRTRVGEPGTPGSSARTRREAPRERATVTAEPSTQVAES
VAPSVPPAVAHAEQLVDTAILWAASLGTVVGRRLLKTLVRTKEELEDVLAEAEALRQAWQRGHQPTDRSRQSTDA

Sequences:

>Translated_155_residues
MHEQERDEQAREARSPDDVAAAEHREAEPSERASPERDGQPRRTRVGEPGTPGSSARTRREAPRERATVTAEPSTQVAES
VAPSVPPAVAHAEQLVDTAILWAASLGTVVGRRLLKTLVRTKEELEDVLAEAEALRQAWQRGHQPTDRSRQSTDA
>Mature_155_residues
MHEQERDEQAREARSPDDVAAAEHREAEPSERASPERDGQPRRTRVGEPGTPGSSARTRREAPRERATVTAEPSTQVAES
VAPSVPPAVAHAEQLVDTAILWAASLGTVVGRRLLKTLVRTKEELEDVLAEAEALRQAWQRGHQPTDRSRQSTDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17026; Mature: 17026

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEQERDEQAREARSPDDVAAAEHREAEPSERASPERDGQPRRTRVGEPGTPGSSARTRR
CCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
EAPRERATVTAEPSTQVAESVAPSVPPAVAHAEQLVDTAILWAASLGTVVGRRLLKTLVR
HCHHHHCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEELEDVLAEAEALRQAWQRGHQPTDRSRQSTDA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHEQERDEQAREARSPDDVAAAEHREAEPSERASPERDGQPRRTRVGEPGTPGSSARTRR
CCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
EAPRERATVTAEPSTQVAESVAPSVPPAVAHAEQLVDTAILWAASLGTVVGRRLLKTLVR
HCHHHHCEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEELEDVLAEAEALRQAWQRGHQPTDRSRQSTDA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA