| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is mrpE [H]
Identifier: 221635777
GI number: 221635777
Start: 357306
End: 357779
Strand: Reverse
Name: mrpE [H]
Synonym: trd_A0371
Alternate gene names: 221635777
Gene position: 357779-357306 (Counterclockwise)
Preceding gene: 221635778
Following gene: 221635776
Centisome position: 38.98
GC content: 61.18
Gene sequence:
>474_bases GTGACGCTGTTCCTGCTCAATCTTCTGCTCGCCCTCGTCTGGGCTATGGCAGTCGGCCGCTTCACCGTTCCCCAACTGCT ACTCGGCTACGTGCTCGGATTTCTCGTGCTCGCCACGCTCGAGCCACTCTGGGGCACGGCACAGTACAGCGGACGCATCC TGCGTGGGCTGCGCTTCATCGCTTTTTTCTTTGCGGAACTCCTCCTGAGTTCTCTTCAGATCGCCTACGACTCGCTCACT CCGCGCCTGCGAGCCACTCCCCGTATCATCGCTGTCCCGCTCGATGCTGCCACCGAGACCGAGATCACGCTCTTGGCGAA CTTTCTCACGCTCACTCCGGGGACCCTCTCACTGGACATCTCGGCCGACCGCCGAACACTTTATGTCCACGCCATGTACG CCCGCGATCGGCAGACATTCCTGACCGAAGTGAAGCGTGGTCTGGAAGCTCGCCTCCTGGAGGTTCTGCGATGA
Upstream 100 bases:
>100_bases CGACTCGCGCAGCAGACCAACTGCTCGATCCTCAGATCTACCAGCGAGCCGTGCTCGGCCAGCTCGGATCACCAGCACTC GCATCGATCGGAGGTGCACC
Downstream 100 bases:
>100_bases GCGAGCGACTGATCGGCTTTTCCGGTGTCTCTCCTCTTATCGCGCTCAGCATGCTTCTGCTCACGGTGGGACTTCTGCTC GCCCTCGTCCGGGTAGTCCG
Product: cation antiporter
Products: NA
Alternate protein names: Mrp complex subunit E; Multiple resistance and pH homeostasis protein E [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTLFLLNLLLALVWAMAVGRFTVPQLLLGYVLGFLVLATLEPLWGTAQYSGRILRGLRFIAFFFAELLLSSLQIAYDSLT PRLRATPRIIAVPLDAATETEITLLANFLTLTPGTLSLDISADRRTLYVHAMYARDRQTFLTEVKRGLEARLLEVLR
Sequences:
>Translated_157_residues MTLFLLNLLLALVWAMAVGRFTVPQLLLGYVLGFLVLATLEPLWGTAQYSGRILRGLRFIAFFFAELLLSSLQIAYDSLT PRLRATPRIIAVPLDAATETEITLLANFLTLTPGTLSLDISADRRTLYVHAMYARDRQTFLTEVKRGLEARLLEVLR >Mature_156_residues TLFLLNLLLALVWAMAVGRFTVPQLLLGYVLGFLVLATLEPLWGTAQYSGRILRGLRFIAFFFAELLLSSLQIAYDSLTP RLRATPRIIAVPLDAATETEITLLANFLTLTPGTLSLDISADRRTLYVHAMYARDRQTFLTEVKRGLEARLLEVLR
Specific function: Mrp complex is a Na(+)/H(+) antiporter involved in Na(+) excretion and Na(+) resistance [H]
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002758 [H]
Pfam domain/function: PF01899 MNHE [H]
EC number: NA
Molecular weight: Translated: 17641; Mature: 17510
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFLLNLLLALVWAMAVGRFTVPQLLLGYVLGFLVLATLEPLWGTAQYSGRILRGLRFI CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AFFFAELLLSSLQIAYDSLTPRLRATPRIIAVPLDAATETEITLLANFLTLTPGTLSLDI HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE SADRRTLYVHAMYARDRQTFLTEVKRGLEARLLEVLR CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TLFLLNLLLALVWAMAVGRFTVPQLLLGYVLGFLVLATLEPLWGTAQYSGRILRGLRFI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AFFFAELLLSSLQIAYDSLTPRLRATPRIIAVPLDAATETEITLLANFLTLTPGTLSLDI HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE SADRRTLYVHAMYARDRQTFLTEVKRGLEARLLEVLR CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11356194 [H]