| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635776
Identifier: 221635776
GI number: 221635776
Start: 357013
End: 357309
Strand: Reverse
Name: 221635776
Synonym: trd_A0370
Alternate gene names: NA
Gene position: 357309-357013 (Counterclockwise)
Preceding gene: 221635777
Following gene: 221635775
Centisome position: 38.93
GC content: 62.29
Gene sequence:
>297_bases ATGAGCGAGCGACTGATCGGCTTTTCCGGTGTCTCTCCTCTTATCGCGCTCAGCATGCTTCTGCTCACGGTGGGACTTCT GCTCGCCCTCGTCCGGGTAGTCCGTGGCCCCACCATTCCGGACCGCGTCATCGCGCTCGACTTCATGGCCTCGTTAGTCG TCGGCTTACTGCTCCTGCTCGGTGCGACGCTCGAACTCCTCTCGATCGTCGACATCGCGATCGTGCTCGCCCTCATCGCG TTCTTGAGCACGGTCGCTTTCGCCTCGCTCATCGAGCGGAGGACGCGCGAACCATGA
Upstream 100 bases:
>100_bases GCCGAACACTTTATGTCCACGCCATGTACGCCCGCGATCGGCAGACATTCCTGACCGAAGTGAAGCGTGGTCTGGAAGCT CGCCTCCTGGAGGTTCTGCG
Downstream 100 bases:
>100_bases CCGTGCTAGCTGGTCTACTGGCGCTGATCGGCGCGCTCCTCATGGTGATCGCTGGCATCGGCCTTCTGCGGATGCCGGAC TTCTACACCCGCATGCAGGC
Product: multiple resistance and pH regulation protein F
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSERLIGFSGVSPLIALSMLLLTVGLLLALVRVVRGPTIPDRVIALDFMASLVVGLLLLLGATLELLSIVDIAIVLALIA FLSTVAFASLIERRTREP
Sequences:
>Translated_98_residues MSERLIGFSGVSPLIALSMLLLTVGLLLALVRVVRGPTIPDRVIALDFMASLVVGLLLLLGATLELLSIVDIAIVLALIA FLSTVAFASLIERRTREP >Mature_97_residues SERLIGFSGVSPLIALSMLLLTVGLLLALVRVVRGPTIPDRVIALDFMASLVVGLLLLLGATLELLSIVDIAIVLALIAF LSTVAFASLIERRTREP
Specific function: Unknown
COG id: COG2212
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10424; Mature: 10293
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLIGFSGVSPLIALSMLLLTVGLLLALVRVVRGPTIPDRVIALDFMASLVVGLLLLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GATLELLSIVDIAIVLALIAFLSTVAFASLIERRTREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SERLIGFSGVSPLIALSMLLLTVGLLLALVRVVRGPTIPDRVIALDFMASLVVGLLLLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH GATLELLSIVDIAIVLALIAFLSTVAFASLIERRTREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA