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The map label for this gene is ytxM [H]

Identifier: 221635666

GI number: 221635666

Start: 245410

End: 246246

Strand: Reverse

Name: ytxM [H]

Synonym: trd_A0259

Alternate gene names: 221635666

Gene position: 246246-245410 (Counterclockwise)

Preceding gene: 221635667

Following gene: 221635660

Centisome position: 26.83

GC content: 72.04

Gene sequence:

>837_bases
GTGTGGGACGAAGAGCGGACGATCGCTGTCCGCGGCGTCACTTACCGCGTCTGTGCGGCCGGGCAGGGACCGCCGCTGGC
CCTGCTGCACGGGTTCGCTGGCTCGAGCGCGCACTGGGCGCCGCTCGCTCCGGAACTGGTCGCTCGCGGCTGGCGCGTCA
TCGCACCGGATCTCCTCGGCCACGGTCGGACCGACGCACCGAGCGCGCCGACCCGCTACGCGGCTGCCGAGCAGGTGGCC
GACCTGGCGAGCCTGCTCGGCGAACTCGTTTCCGGACCGGTCAGGCTGCTCGGCTACTCGATGGGCGGGCGACTAGCGCT
CCACCTGGCACTCGCCCATCCCGAGCGGATCGCGGCGCTCGTCCTGGAAAGCGCCTCACCAGGACTCGACGACCCGGCCG
AGCGTGCTGCCCGCCAGCGTGCCGACGAGGAACTCGCCACCGCGATCGAGCAGCGGGGCATGGACTGGTTCGCCGACTAT
TGGGAGCGCTTGCCACTCTTCGCCAGCCGGCAGCGGCTGAGCGCCGAACGACGCGCCGCGCTGCGCGCCGAGTGGCTGGC
CCAGCGCCCGCACGGGCTGGGTGCCTCCCTGCGCGGCTTCGGCACCGGCAGCATGCCAGCGGTGTGGGACCGCTTGTCCG
AGCTGCGCATGCCGGTCCTGGTGATCGCTGGAGCGCTCGATACCCGCTATGCCGCGCTCAGCCAGGCGATGGCCGCACGC
ATCCCCGCAAGCCAGCTGGTGATCGTCCCCGCGGCCGGGCATACCGTGCATCTGGAGCAGCCCGCAGCCTTCCTGGCTGC
ACTCGAGCGCTTTTTTCGCCAGCTGCCCGACCGCTAA

Upstream 100 bases:

>100_bases
GCAGCGACCGGCAGCGCAACGTCGTGCTCCACCAGGAGCTCTGGGCACGAGCGCGCGCCGCGGTGCGGGACGCGCTGGCC
GCGGGAACCCGGCGATGAGG

Downstream 100 bases:

>100_bases
CGTCCACTCGCCGCTCGCGCCTCCGGGGCCAATGGTCCGATCCAGCAGCAGTACCCGTCGTCCGTCAGGGTCGCCAGGAC
GCGCTCGTCGCCCCGTCGGA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MWDEERTIAVRGVTYRVCAAGQGPPLALLHGFAGSSAHWAPLAPELVARGWRVIAPDLLGHGRTDAPSAPTRYAAAEQVA
DLASLLGELVSGPVRLLGYSMGGRLALHLALAHPERIAALVLESASPGLDDPAERAARQRADEELATAIEQRGMDWFADY
WERLPLFASRQRLSAERRAALRAEWLAQRPHGLGASLRGFGTGSMPAVWDRLSELRMPVLVIAGALDTRYAALSQAMAAR
IPASQLVIVPAAGHTVHLEQPAAFLAALERFFRQLPDR

Sequences:

>Translated_278_residues
MWDEERTIAVRGVTYRVCAAGQGPPLALLHGFAGSSAHWAPLAPELVARGWRVIAPDLLGHGRTDAPSAPTRYAAAEQVA
DLASLLGELVSGPVRLLGYSMGGRLALHLALAHPERIAALVLESASPGLDDPAERAARQRADEELATAIEQRGMDWFADY
WERLPLFASRQRLSAERRAALRAEWLAQRPHGLGASLRGFGTGSMPAVWDRLSELRMPVLVIAGALDTRYAALSQAMAAR
IPASQLVIVPAAGHTVHLEQPAAFLAALERFFRQLPDR
>Mature_278_residues
MWDEERTIAVRGVTYRVCAAGQGPPLALLHGFAGSSAHWAPLAPELVARGWRVIAPDLLGHGRTDAPSAPTRYAAAEQVA
DLASLLGELVSGPVRLLGYSMGGRLALHLALAHPERIAALVLESASPGLDDPAERAARQRADEELATAIEQRGMDWFADY
WERLPLFASRQRLSAERRAALRAEWLAQRPHGLGASLRGFGTGSMPAVWDRLSELRMPVLVIAGALDTRYAALSQAMAAR
IPASQLVIVPAAGHTVHLEQPAAFLAALERFFRQLPDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=254, Percent_Identity=29.9212598425197, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30033; Mature: 30033

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDEERTIAVRGVTYRVCAAGQGPPLALLHGFAGSSAHWAPLAPELVARGWRVIAPDLLG
CCCCCCEEEEECCEEEEEECCCCCCHHEEECCCCCCCCCCCCCHHHHHCCCEEECHHHHC
HGRTDAPSAPTRYAAAEQVADLASLLGELVSGPVRLLGYSMGGRLALHLALAHPERIAAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEHHCHHHHHHH
VLESASPGLDDPAERAARQRADEELATAIEQRGMDWFADYWERLPLFASRQRLSAERRAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
LRAEWLAQRPHGLGASLRGFGTGSMPAVWDRLSELRMPVLVIAGALDTRYAALSQAMAAR
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHHH
IPASQLVIVPAAGHTVHLEQPAAFLAALERFFRQLPDR
CCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWDEERTIAVRGVTYRVCAAGQGPPLALLHGFAGSSAHWAPLAPELVARGWRVIAPDLLG
CCCCCCEEEEECCEEEEEECCCCCCHHEEECCCCCCCCCCCCCHHHHHCCCEEECHHHHC
HGRTDAPSAPTRYAAAEQVADLASLLGELVSGPVRLLGYSMGGRLALHLALAHPERIAAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEHHCHHHHHHH
VLESASPGLDDPAERAARQRADEELATAIEQRGMDWFADYWERLPLFASRQRLSAERRAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
LRAEWLAQRPHGLGASLRGFGTGSMPAVWDRLSELRMPVLVIAGALDTRYAALSQAMAAR
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEECHHHHHHHHHHHHHHHH
IPASQLVIVPAAGHTVHLEQPAAFLAALERFFRQLPDR
CCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]