Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635601

Identifier: 221635601

GI number: 221635601

Start: 178229

End: 179482

Strand: Reverse

Name: 221635601

Synonym: trd_A0195

Alternate gene names: NA

Gene position: 179482-178229 (Counterclockwise)

Preceding gene: 221635603

Following gene: 221635600

Centisome position: 19.56

GC content: 73.68

Gene sequence:

>1254_bases
GTGGTCCCCGCGCGGGTGCGCTGTGCGGGCGATTCCCGGTACCGGTCGTGCACGCGCGAGCCGATGAGGCTGCTGCAGCG
CCGAGCAGCCCGGCCAGGTGACCGACCAGCACGGCACCGGTCCTGCGCTCCCGACCAGTCAGATGCATGCCTCGGGGGTC
GACCGCGCCGCAAGGTGCTCCACGCCTCGCCCCCACAGGGGAGACACCGTACCGCCCCCCACGGCCGGAGCTGGTCCCAC
GACGCTGCACACCAACGCCGCACCGATCGTCGAGCACCCGGTATCCCCATCACCTCGGGGTCGGGCGCTGCCTGCCCCGC
CGGCCCGGGAGGACCGGCAATCCAGGGCGGGCGCAGTGGGGAGCGTGTCACCGGGATCGTCAACGCCCACGGTTGGGTGC
CACCGTGTTTGCCGCGCCTGTGGCGCGGTTGGGTGCGGCAGCGCCTCGCCCCGACAGGGGTGGGCGGCGCATCGCCGGTC
GGGCATCCATTTGCCACGGGTGGGCGGCCCGCCCATGCTGTAGGGGTCAGGCGCTGCCTGACCCGCTGGCTTGGCAGGGC
CGGCAATCCCCTGGTGGGGCGCTGGTCACGGTGCCGCTGGGATCGCCGAGGCGGCCGATACACGTCACGAGGGGCTGCCG
TGCCGCAAGGCGACGGGCGCGGCACACCGCGCCCCTGCACCGGTTGGGCGAGCATCCCCAGCAGGGCCCATGCGCGCCGC
GGTTCGGCGGTGCGCTGTCTGCCTTGTAGGGGTCGGGCGTTGCCCGACCCGCCGGCCCGAAGGGCCGGGAATGGGCGTGC
GGCGTGGCCGGATGCCCACAATGCCGAGCGACATGGCCGTGAGGATGATTGCCGCCCAGGTCGCCGAGCCGGTGGGGTGG
TCAGGCGACGCAGCGCATCGCCCTGGCACCGGTTGCGCGGTCCATCCCCTGTAGCCCGATACTTGCCACGGTTCGGCGCT
GCCGACTCCCTGTGTCGGGCTCAGGCGCCGCCCGACCCGCCGGCCCGAAGGGCCGGGAATGGGCGTGCGGTGTCCAGCGC
ACGGTCCGTCCTACCGGGGCCAGCAGTCACGCCGCGGGCGACTGGTGACCGCGCCAACGGTCGGCCCATCCAGTGCGTGC
CGCGCCGGTGGACGACGTGCCGCGTCGCTCCGACCGACGCGCTGACACTGCAGACAGCGAGATCCCGCTGCATCACGTTC
GCTCGCCACATCGTGAGCAGTCGCCTTGCGCTCGGCTCCTACCCGTTCGGGTAG

Upstream 100 bases:

>100_bases
CACTCAGTCGGTCAACCGTGCGGTCCATCAGTCCCTCCCGCACGAGTGTGCGCCGAGCGGAGTCGATGGCGCCAGGCCAG
CACGGGCAGCGTGTGCCAGT

Downstream 100 bases:

>100_bases
GAAGAGACTCCCCGGTTGGAGAGTCGCGAAACTACCCGCCTGGGCGTGTTCGCTCCGTCGTTCCCCGACGAGACTGAAAA
CGGGAACGAGGAGCGGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MVPARVRCAGDSRYRSCTREPMRLLQRRAARPGDRPARHRSCAPDQSDACLGGRPRRKVLHASPPQGRHRTAPHGRSWSH
DAAHQRRTDRRAPGIPITSGSGAACPAGPGGPAIQGGRSGERVTGIVNAHGWVPPCLPRLWRGWVRQRLAPTGVGGASPV
GHPFATGGRPAHAVGVRRCLTRWLGRAGNPLVGRWSRCRWDRRGGRYTSRGAAVPQGDGRGTPRPCTGWASIPSRAHARR
GSAVRCLPCRGRALPDPPARRAGNGRAAWPDAHNAERHGREDDCRPGRRAGGVVRRRSASPWHRLRGPSPVARYLPRFGA
ADSLCRAQAPPDPPARRAGNGRAVSSARSVLPGPAVTPRATGDRANGRPIQCVPRRWTTCRVAPTDALTLQTARSRCITF
ARHIVSSRLALGSYPFG

Sequences:

>Translated_417_residues
MVPARVRCAGDSRYRSCTREPMRLLQRRAARPGDRPARHRSCAPDQSDACLGGRPRRKVLHASPPQGRHRTAPHGRSWSH
DAAHQRRTDRRAPGIPITSGSGAACPAGPGGPAIQGGRSGERVTGIVNAHGWVPPCLPRLWRGWVRQRLAPTGVGGASPV
GHPFATGGRPAHAVGVRRCLTRWLGRAGNPLVGRWSRCRWDRRGGRYTSRGAAVPQGDGRGTPRPCTGWASIPSRAHARR
GSAVRCLPCRGRALPDPPARRAGNGRAAWPDAHNAERHGREDDCRPGRRAGGVVRRRSASPWHRLRGPSPVARYLPRFGA
ADSLCRAQAPPDPPARRAGNGRAVSSARSVLPGPAVTPRATGDRANGRPIQCVPRRWTTCRVAPTDALTLQTARSRCITF
ARHIVSSRLALGSYPFG
>Mature_417_residues
MVPARVRCAGDSRYRSCTREPMRLLQRRAARPGDRPARHRSCAPDQSDACLGGRPRRKVLHASPPQGRHRTAPHGRSWSH
DAAHQRRTDRRAPGIPITSGSGAACPAGPGGPAIQGGRSGERVTGIVNAHGWVPPCLPRLWRGWVRQRLAPTGVGGASPV
GHPFATGGRPAHAVGVRRCLTRWLGRAGNPLVGRWSRCRWDRRGGRYTSRGAAVPQGDGRGTPRPCTGWASIPSRAHARR
GSAVRCLPCRGRALPDPPARRAGNGRAAWPDAHNAERHGREDDCRPGRRAGGVVRRRSASPWHRLRGPSPVARYLPRFGA
ADSLCRAQAPPDPPARRAGNGRAVSSARSVLPGPAVTPRATGDRANGRPIQCVPRRWTTCRVAPTDALTLQTARSRCITF
ARHIVSSRLALGSYPFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44937; Mature: 44937

Theoretical pI: Translated: 12.46; Mature: 12.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPARVRCAGDSRYRSCTREPMRLLQRRAARPGDRPARHRSCAPDQSDACLGGRPRRKVL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCC
HASPPQGRHRTAPHGRSWSHDAAHQRRTDRRAPGIPITSGSGAACPAGPGGPAIQGGRSG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
ERVTGIVNAHGWVPPCLPRLWRGWVRQRLAPTGVGGASPVGHPFATGGRPAHAVGVRRCL
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TRWLGRAGNPLVGRWSRCRWDRRGGRYTSRGAAVPQGDGRGTPRPCTGWASIPSRAHARR
HHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHC
GSAVRCLPCRGRALPDPPARRAGNGRAAWPDAHNAERHGREDDCRPGRRAGGVVRRRSAS
CCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCHHCCCCCC
PWHRLRGPSPVARYLPRFGAADSLCRAQAPPDPPARRAGNGRAVSSARSVLPGPAVTPRA
HHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCC
TGDRANGRPIQCVPRRWTTCRVAPTDALTLQTARSRCITFARHIVSSRLALGSYPFG
CCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVPARVRCAGDSRYRSCTREPMRLLQRRAARPGDRPARHRSCAPDQSDACLGGRPRRKVL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCC
HASPPQGRHRTAPHGRSWSHDAAHQRRTDRRAPGIPITSGSGAACPAGPGGPAIQGGRSG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
ERVTGIVNAHGWVPPCLPRLWRGWVRQRLAPTGVGGASPVGHPFATGGRPAHAVGVRRCL
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TRWLGRAGNPLVGRWSRCRWDRRGGRYTSRGAAVPQGDGRGTPRPCTGWASIPSRAHARR
HHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHC
GSAVRCLPCRGRALPDPPARRAGNGRAAWPDAHNAERHGREDDCRPGRRAGGVVRRRSAS
CCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCHHCCCCCC
PWHRLRGPSPVARYLPRFGAADSLCRAQAPPDPPARRAGNGRAVSSARSVLPGPAVTPRA
HHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCC
TGDRANGRPIQCVPRRWTTCRVAPTDALTLQTARSRCITFARHIVSSRLALGSYPFG
CCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA