Click here to switch to the map view.

The map label for this gene is 221635580

Identifier: 221635580

GI number: 221635580

Start: 160393

End: 161196

Strand: Reverse

Name: 221635580

Synonym: trd_A0174

Alternate gene names: NA

Gene position: 161196-160393 (Counterclockwise)

Preceding gene: 221635587

Following gene: 221635579

Centisome position: 17.56

GC content: 67.66

Gene sequence:

>804_bases
GTGCTCAGCATAGGCGATGAGCGTCTGATCGAAGGCACGCACCTCGGCCGGATCCGGCTCCCGCCCGGTGATCATCCAGA
GGAAGTTCTCCGGATAGGAACGGCGCCGGTCGGGCAGCAGCGGCTCTCCCCCTTCCGCGACGCGGATCAGGTTGGCCACG
ATCGTCGCGGACTGTGCGATGACCCGGAAGCCGCTCTGCCGGTCCTGCTCCGGATCCGCCGAGTTGGCCGCCTGATCCCA
GCCGCCCAGCGCCGAGACCGCCGTGCGCAGGCGGTCCATGGCATCCATCTCGCGCGGCAGCAGCCGCAAGATCTGCCAGA
TCTCCGCTGGCACGTCGGCCACGGCGAGCAACTGCTGCTCCAGTGCCGATCGCTCCGCCTCGGCCGGCAGCTGGCCATTC
ACCAGGAGCCCCACCACGTCCACGTAGGTCCGCTGCCGAGCCAGGTCGAGCAGGTTGTAGCCGCGGACGACGATCTCCTC
ATGTTCGACATCGAGATAGGAGATCGCTGTTTCGGTAGCGATCACGCCCTCCAACCCTGGCCGGTACTCTACTGCACCCA
TCGCTTGCCTCCTCAGCGCCAGGACGAGACCGATCCACTCGCCCTGATTCTAACCCTCCATTCGAGAAACCGGACGCCGT
GTGCAGCCGACCCGAACACCACGCGACTTTCCCTCCGCCTGCCCCGCGTTCGCCGGTCGGCGGAACTGCCGACGCCCTCC
GGCCACGGCTACCCATCCGCAACCCTGCCGACCCAGAGCCGCCTGATCGCCCTTTCCCCCAGCAGCACTGCCCCCACCCC
TTGA

Upstream 100 bases:

>100_bases
AGCGCCCCTTGAGCGAGGCGACTGCGCCGGTCAAGGCACCATAGAGATCAGCCAGCGTCGAGGCGATGACCCGCGCCGCG
AAAGTCGAGTTCGGGAGTTC

Downstream 100 bases:

>100_bases
CAACGACACGAATACGGAGTACTTTGTATAACAAAGTACTCCGCAGATGCTCGGCACCGAACGGAGGGGCACCGTGCACC
AGCCGGAACTGGAAGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MLSIGDERLIEGTHLGRIRLPPGDHPEEVLRIGTAPVGQQRLSPFRDADQVGHDRRGLCDDPEAALPVLLRIRRVGRLIP
AAQRRDRRAQAVHGIHLARQQPQDLPDLRWHVGHGEQLLLQCRSLRLGRQLAIHQEPHHVHVGPLPSQVEQVVAADDDLL
MFDIEIGDRCFGSDHALQPWPVLYCTHRLPPQRQDETDPLALILTLHSRNRTPCAADPNTTRLSLRLPRVRRSAELPTPS
GHGYPSATLPTQSRLIALSPSSTAPTP

Sequences:

>Translated_267_residues
MLSIGDERLIEGTHLGRIRLPPGDHPEEVLRIGTAPVGQQRLSPFRDADQVGHDRRGLCDDPEAALPVLLRIRRVGRLIP
AAQRRDRRAQAVHGIHLARQQPQDLPDLRWHVGHGEQLLLQCRSLRLGRQLAIHQEPHHVHVGPLPSQVEQVVAADDDLL
MFDIEIGDRCFGSDHALQPWPVLYCTHRLPPQRQDETDPLALILTLHSRNRTPCAADPNTTRLSLRLPRVRRSAELPTPS
GHGYPSATLPTQSRLIALSPSSTAPTP
>Mature_267_residues
MLSIGDERLIEGTHLGRIRLPPGDHPEEVLRIGTAPVGQQRLSPFRDADQVGHDRRGLCDDPEAALPVLLRIRRVGRLIP
AAQRRDRRAQAVHGIHLARQQPQDLPDLRWHVGHGEQLLLQCRSLRLGRQLAIHQEPHHVHVGPLPSQVEQVVAADDDLL
MFDIEIGDRCFGSDHALQPWPVLYCTHRLPPQRQDETDPLALILTLHSRNRTPCAADPNTTRLSLRLPRVRRSAELPTPS
GHGYPSATLPTQSRLIALSPSSTAPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29767; Mature: 29767

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIGDERLIEGTHLGRIRLPPGDHPEEVLRIGTAPVGQQRLSPFRDADQVGHDRRGLCD
CCCCCCHHHCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHCCCCCCHHHCCCCCCCCCC
DPEAALPVLLRIRRVGRLIPAAQRRDRRAQAVHGIHLARQQPQDLPDLRWHVGHGEQLLL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH
QCRSLRLGRQLAIHQEPHHVHVGPLPSQVEQVVAADDDLLMFDIEIGDRCFGSDHALQPW
HHHHHHHCCEEEECCCCCEEECCCCHHHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCC
PVLYCTHRLPPQRQDETDPLALILTLHSRNRTPCAADPNTTRLSLRLPRVRRSAELPTPS
EEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCC
GHGYPSATLPTQSRLIALSPSSTAPTP
CCCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MLSIGDERLIEGTHLGRIRLPPGDHPEEVLRIGTAPVGQQRLSPFRDADQVGHDRRGLCD
CCCCCCHHHCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHCCCCCCHHHCCCCCCCCCC
DPEAALPVLLRIRRVGRLIPAAQRRDRRAQAVHGIHLARQQPQDLPDLRWHVGHGEQLLL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH
QCRSLRLGRQLAIHQEPHHVHVGPLPSQVEQVVAADDDLLMFDIEIGDRCFGSDHALQPW
HHHHHHHCCEEEECCCCCEEECCCCHHHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCC
PVLYCTHRLPPQRQDETDPLALILTLHSRNRTPCAADPNTTRLSLRLPRVRRSAELPTPS
EEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCC
GHGYPSATLPTQSRLIALSPSSTAPTP
CCCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA