| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635546
Identifier: 221635546
GI number: 221635546
Start: 131104
End: 131598
Strand: Reverse
Name: 221635546
Synonym: trd_A0139
Alternate gene names: NA
Gene position: 131598-131104 (Counterclockwise)
Preceding gene: 221635547
Following gene: 221635540
Centisome position: 14.34
GC content: 65.45
Gene sequence:
>495_bases GTGAGCGGTCGTCCTCGCTGGCAGCTGGTCTCGCTCGCTCTCGCTCTGGCTGGAGCTGGTGTGGCCGGGTATCTCACGCT CGTGGCCTACGATGAGTCGCTCCTCGTCTGTGGCCTCGGCGACTGTGCGACCGTGCAGAACAGTCCCTATGCCAAGCTGG GCGGTATTCCGATCGCCCTCTTGGGGCTGCTCATGTACCTCGTGCTGCTCGGGCTCGGCGTCGTGCGCTGGCGCCTCGTT CACCAGACCGAACTCCTCACCAGCGCCAACACCAGCATCGCGCTCGCCGGAACGCTCTTTTCCGGGTATCTCACTTACCT CGAACTCTTCGTCATCCATGCCATCTGCCAGTGGTGCGTTGCGAGCGCGGTCATCGTCACGCTGCTGCTTCTCGTCGAAG GATGGGGACTGCGCCAACTGCTGCGCGCTGAGACCTCCGCGCTCGTCTCCGCACCCGCTCCGCCTCGCCAGCGGCGTCAG CAACCTGCGCCGTAG
Upstream 100 bases:
>100_bases TCGGTGTCCGTGCGACGCCGTCCTTCAGCGTGAACGGGAGCGCGCCCTTCACCATCCGCAGTCTGAGTGATCTCACCCAG CGCATCGAGGAGGCATCGAA
Downstream 100 bases:
>100_bases CGTGCCAGCAAGCTCGCTCGGCTCATCCAGGCTCGACCGGGCCAGGCCCGTTCCCGGTAGCGTTCGGCCATTCGCCAGCC AAGCGGGTGGTAGATGGCGA
Product: vitamin K epoxide reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSGRPRWQLVSLALALAGAGVAGYLTLVAYDESLLVCGLGDCATVQNSPYAKLGGIPIALLGLLMYLVLLGLGVVRWRLV HQTELLTSANTSIALAGTLFSGYLTYLELFVIHAICQWCVASAVIVTLLLLVEGWGLRQLLRAETSALVSAPAPPRQRRQ QPAP
Sequences:
>Translated_164_residues MSGRPRWQLVSLALALAGAGVAGYLTLVAYDESLLVCGLGDCATVQNSPYAKLGGIPIALLGLLMYLVLLGLGVVRWRLV HQTELLTSANTSIALAGTLFSGYLTYLELFVIHAICQWCVASAVIVTLLLLVEGWGLRQLLRAETSALVSAPAPPRQRRQ QPAP >Mature_163_residues SGRPRWQLVSLALALAGAGVAGYLTLVAYDESLLVCGLGDCATVQNSPYAKLGGIPIALLGLLMYLVLLGLGVVRWRLVH QTELLTSANTSIALAGTLFSGYLTYLELFVIHAICQWCVASAVIVTLLLLVEGWGLRQLLRAETSALVSAPAPPRQRRQQ PAP
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17497; Mature: 17366
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRPRWQLVSLALALAGAGVAGYLTLVAYDESLLVCGLGDCATVQNSPYAKLGGIPIAL CCCCCHHHHHHHHHHHHCCCHHHHHHHHEECCCEEEEECCCCCCCCCCCCHHHCCCHHHH LGLLMYLVLLGLGVVRWRLVHQTELLTSANTSIALAGTLFSGYLTYLELFVIHAICQWCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAVIVTLLLLVEGWGLRQLLRAETSALVSAPAPPRQRRQQPAP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure SGRPRWQLVSLALALAGAGVAGYLTLVAYDESLLVCGLGDCATVQNSPYAKLGGIPIAL CCCCHHHHHHHHHHHHCCCHHHHHHHHEECCCEEEEECCCCCCCCCCCCHHHCCCHHHH LGLLMYLVLLGLGVVRWRLVHQTELLTSANTSIALAGTLFSGYLTYLELFVIHAICQWCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAVIVTLLLLVEGWGLRQLLRAETSALVSAPAPPRQRRQQPAP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA