Click here to switch to the map view.

The map label for this gene is cmr

Identifier: 221635520

GI number: 221635520

Start: 109818

End: 110888

Strand: Reverse

Name: cmr

Synonym: trd_A0114

Alternate gene names: NA

Gene position: 110888-109818 (Counterclockwise)

Preceding gene: 221635521

Following gene: 221635519

Centisome position: 12.08

GC content: 71.15

Gene sequence:

>1071_bases
GTGACGACGCTGTTCCTGGAACCGCTCGACGTCTGGCTCTTCCGCGACGGCCGTCCCTTCACCGCTGGCCAGCAGTTCCG
CGCCGCCAGCCGCTTCCCACCCAGTCCGCTGGTGGTGCAGGGAGCGTTGCGTGCCTACCACCTCATGGTCCACTCCACGG
TTCCCCCCTGGGACGCCGCAGCTGTCGCCGGGGTGGTCGGTGGACCGGATGACTGGGGGCCGCTGCGCCTGGTCGGCCCG
CTCGTCGCACGTCGGACCGCATCCGGCGAGTTCGAGGTCTTGCTTCCCCCACCGGCCGATGCAGCGTTCCCCGGTCGCCA
GGCCCGGCGCCTGCCGCTGCCCGAGCAGCCACCGGAGTGGCTGCGTCTGCCCACACCGACACCCGCACTCTTCCCGCTGT
GGCACGCAGGCGAGCCAGTGTCCGAGAAGGCCAGCCAGCGGCTCTGGCTGCGCCTGACCGATTTCGCTGCCTACTCCCGC
GGCGAGCCCGTTCCCGGTGTCCCGCAAGAGGAACTCTGGGCGGAGGAGGTGCGGATCGGGATCGCCCAGGACTCGTCCCG
CCGCACGACGCGCGAGGGACTCTACTACGAGGCGCGCTACGTCCGACCAGCGCCTGGCGTGGGGCTGCTGGTCTCGTTCA
CGGGGCTCGACTGGCCAGAGCCGGCGGGAGTCCTCGCGCTCGGTGGGGAACGCCGGTCGGCACGGTTCGAGGTCGTCACC
TCGTTCGCTCCACCACCGGTTCCCGAGCCGTTGCCCGAGCGGTTCGTCCTCTTCTTCCTGACTCCCGCCGTCTTCGAGCG
CGGCTGGCTCCCGCGGGATTGGGGCGCCTTCTTCGAAGGTTCCGTCGAGCTGGTCGCGGCGGCGCTCGATCGCTACGAGA
CGGTCGGTGGCTTCGATCTCGCGCGTGGTCGCGAGCGTCCCGCGCACCGCGCCGTGCCGGCCGGGAGCGTCTACTACTTC
GTCGCCCGTGGCGAGGCCCGGCTCCGCCGCACCAGCGACCTTCCCTGGCCGACTGTGAGCGACTGGGGTGCCGAGATCGG
TTTCGGGACAGTGCTGATCGGAGGATGGTGA

Upstream 100 bases:

>100_bases
GCGAGGACGACTCGCGGCGGTTCGAGCGCGTGCCCTCCGGACCGGCACAGTTGGCGGACTGGCTCGCGCTGGCGCGCTTC
CTGGCGAGAGGAGGTGGCGA

Downstream 100 bases:

>100_bases
GATGGCCGAAGCGAGTGCCTTGCTCTTCGCCTACTGCGAAACACCGGTACACGCTGGGACCGGCCGCGCCGTCGGCACGG
TCGATCTCCCGATCCAGCGC

Product: crispr-associated protein, Cmr3 family

Products: NA

Alternate protein names: CRISPR-Associated Cmr3 Family Protein; CRISPR-Associated Protein; Crispr-Associated Protein Cmr3 Family; Cmr3 Family CRISPR-Associated Protein

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTTLFLEPLDVWLFRDGRPFTAGQQFRAASRFPPSPLVVQGALRAYHLMVHSTVPPWDAAAVAGVVGGPDDWGPLRLVGP
LVARRTASGEFEVLLPPPADAAFPGRQARRLPLPEQPPEWLRLPTPTPALFPLWHAGEPVSEKASQRLWLRLTDFAAYSR
GEPVPGVPQEELWAEEVRIGIAQDSSRRTTREGLYYEARYVRPAPGVGLLVSFTGLDWPEPAGVLALGGERRSARFEVVT
SFAPPPVPEPLPERFVLFFLTPAVFERGWLPRDWGAFFEGSVELVAAALDRYETVGGFDLARGRERPAHRAVPAGSVYYF
VARGEARLRRTSDLPWPTVSDWGAEIGFGTVLIGGW

Sequences:

>Translated_356_residues
MTTLFLEPLDVWLFRDGRPFTAGQQFRAASRFPPSPLVVQGALRAYHLMVHSTVPPWDAAAVAGVVGGPDDWGPLRLVGP
LVARRTASGEFEVLLPPPADAAFPGRQARRLPLPEQPPEWLRLPTPTPALFPLWHAGEPVSEKASQRLWLRLTDFAAYSR
GEPVPGVPQEELWAEEVRIGIAQDSSRRTTREGLYYEARYVRPAPGVGLLVSFTGLDWPEPAGVLALGGERRSARFEVVT
SFAPPPVPEPLPERFVLFFLTPAVFERGWLPRDWGAFFEGSVELVAAALDRYETVGGFDLARGRERPAHRAVPAGSVYYF
VARGEARLRRTSDLPWPTVSDWGAEIGFGTVLIGGW
>Mature_355_residues
TTLFLEPLDVWLFRDGRPFTAGQQFRAASRFPPSPLVVQGALRAYHLMVHSTVPPWDAAAVAGVVGGPDDWGPLRLVGPL
VARRTASGEFEVLLPPPADAAFPGRQARRLPLPEQPPEWLRLPTPTPALFPLWHAGEPVSEKASQRLWLRLTDFAAYSRG
EPVPGVPQEELWAEEVRIGIAQDSSRRTTREGLYYEARYVRPAPGVGLLVSFTGLDWPEPAGVLALGGERRSARFEVVTS
FAPPPVPEPLPERFVLFFLTPAVFERGWLPRDWGAFFEGSVELVAAALDRYETVGGFDLARGRERPAHRAVPAGSVYYFV
ARGEARLRRTSDLPWPTVSDWGAEIGFGTVLIGGW

Specific function: Unknown

COG id: COG1769

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39289; Mature: 39158

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLFLEPLDVWLFRDGRPFTAGQQFRAASRFPPSPLVVQGALRAYHLMVHSTVPPWDAA
CCEEEECCEEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCHH
AVAGVVGGPDDWGPLRLVGPLVARRTASGEFEVLLPPPADAAFPGRQARRLPLPEQPPEW
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
LRLPTPTPALFPLWHAGEPVSEKASQRLWLRLTDFAAYSRGEPVPGVPQEELWAEEVRIG
EECCCCCCCEEEEECCCCCHHHHHHHEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHEE
IAQDSSRRTTREGLYYEARYVRPAPGVGLLVSFTGLDWPEPAGVLALGGERRSARFEVVT
EECCCCCCHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEE
SFAPPPVPEPLPERFVLFFLTPAVFERGWLPRDWGAFFEGSVELVAAALDRYETVGGFDL
CCCCCCCCCCCHHHHEEEHCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHH
ARGRERPAHRAVPAGSVYYFVARGEARLRRTSDLPWPTVSDWGAEIGFGTVLIGGW
HCCCCCCHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCEEEEECC
>Mature Secondary Structure 
TTLFLEPLDVWLFRDGRPFTAGQQFRAASRFPPSPLVVQGALRAYHLMVHSTVPPWDAA
CEEEECCEEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCHH
AVAGVVGGPDDWGPLRLVGPLVARRTASGEFEVLLPPPADAAFPGRQARRLPLPEQPPEW
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
LRLPTPTPALFPLWHAGEPVSEKASQRLWLRLTDFAAYSRGEPVPGVPQEELWAEEVRIG
EECCCCCCCEEEEECCCCCHHHHHHHEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHEE
IAQDSSRRTTREGLYYEARYVRPAPGVGLLVSFTGLDWPEPAGVLALGGERRSARFEVVT
EECCCCCCHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEEEEE
SFAPPPVPEPLPERFVLFFLTPAVFERGWLPRDWGAFFEGSVELVAAALDRYETVGGFDL
CCCCCCCCCCCHHHHEEEHCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHH
ARGRERPAHRAVPAGSVYYFVARGEARLRRTSDLPWPTVSDWGAEIGFGTVLIGGW
HCCCCCCHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA