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The map label for this gene is cmr

Identifier: 221635519

GI number: 221635519

Start: 108893

End: 109816

Strand: Reverse

Name: cmr

Synonym: trd_A0113

Alternate gene names: NA

Gene position: 109816-108893 (Counterclockwise)

Preceding gene: 221635520

Following gene: 221635518

Centisome position: 11.97

GC content: 70.35

Gene sequence:

>924_bases
ATGGCCGAAGCGAGTGCCTTGCTCTTCGCCTACTGCGAAACACCGGTACACGCTGGGACCGGCCGCGCCGTCGGCACGGT
CGATCTCCCGATCCAGCGCGAGCGGATCACTGGCTTCCCCATCGCCCAGGCGTCCAGCGTCAAGGGCGTCCTCCGCGCGA
CGACCCAGGCCAACGGCGCCGATGCCGAGCGCCACCGCGCCCTCTTCGGCCCCGATCGCCCGGAGGAAGCTTCCACCCAT
GCTGGAGCGCTCCAAGTGACCGATCTCCAGGTCGTCCTCTTCCCGGTCCGCTCGCTGGCTGGCGTCTTCGCCTGGACGAC
CAGCCCGGCTGTGCTCGCACGCCTGGTGCGCCTGGCCAAGCTGGCCGGGATCGAGGGGCCGGTCGACCCCACCCGCTTCG
CCGGCCTCCAGCCGGGTCAGTGCGCCGTCGCCAATGGCAGCGCGCTCCTCACCCCGGCTGGTCAGCAGGTCGGTGTCGTC
CTCGAGGAGTACAGCTTCACGCTGGCCGGCGAACTGGCCGGTCTCGTCTCGGCGCTGGCCGAGTGGCTGGTCGCCCTCGC
CCTGCCCCAGACGCCGGAATACGCCTGGTGGCGGGAGAACCTGGCCAAGCATCTCTGCGTCCTGCCCGACGACGAGTTCC
GCGACTTCGTTCTCTACGCGACCGAGATCGAGGCCCACGTGCGGCTGAAGGACGAGACCAAGACGGTCGAACCGGGAGCC
CTCTGGACGACCGAGACCTTGCCGGCCGAAACGCTGCTGGTCGGTCTCCTGGCAACGACCCGCTCGCGCTACGACAAGGT
GAACGAGGACGGCCGCGCGCTGCTTGGCTGGTTGACGGGCAAGCTCGACGGCCGGCGTGTCCGTCTGGGTGGCGACGAGA
CGACCGGCCGCGGTGCCGTCGTCCTGCGCGTCGCGCGGGTATGA

Upstream 100 bases:

>100_bases
GAGGCCCGGCTCCGCCGCACCAGCGACCTTCCCTGGCCGACTGTGAGCGACTGGGGTGCCGAGATCGGTTTCGGGACAGT
GCTGATCGGAGGATGGTGAG

Downstream 100 bases:

>100_bases
AGGGAGGGTGAGCCGTGAGCCAGCCGGTACACCGTACGACGCAGCAGCGCACACTGGAGCAACAGCGTGCAGCCCGCGCC
TGGGCATGCGTGGCTGCGGT

Product: crispr-associated ramp protein, Cmr4 family

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; Cmr4 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Cmr4 Family Protein; CRISPR-Associated Ramp Protein Cmr4 Family; Crispr-Associated Ramp Protein Cmr4 Family; CRISPR-Associated RAMP Protein; RAMP Superfamily DNA Repair Protein

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAEASALLFAYCETPVHAGTGRAVGTVDLPIQRERITGFPIAQASSVKGVLRATTQANGADAERHRALFGPDRPEEASTH
AGALQVTDLQVVLFPVRSLAGVFAWTTSPAVLARLVRLAKLAGIEGPVDPTRFAGLQPGQCAVANGSALLTPAGQQVGVV
LEEYSFTLAGELAGLVSALAEWLVALALPQTPEYAWWRENLAKHLCVLPDDEFRDFVLYATEIEAHVRLKDETKTVEPGA
LWTTETLPAETLLVGLLATTRSRYDKVNEDGRALLGWLTGKLDGRRVRLGGDETTGRGAVVLRVARV

Sequences:

>Translated_307_residues
MAEASALLFAYCETPVHAGTGRAVGTVDLPIQRERITGFPIAQASSVKGVLRATTQANGADAERHRALFGPDRPEEASTH
AGALQVTDLQVVLFPVRSLAGVFAWTTSPAVLARLVRLAKLAGIEGPVDPTRFAGLQPGQCAVANGSALLTPAGQQVGVV
LEEYSFTLAGELAGLVSALAEWLVALALPQTPEYAWWRENLAKHLCVLPDDEFRDFVLYATEIEAHVRLKDETKTVEPGA
LWTTETLPAETLLVGLLATTRSRYDKVNEDGRALLGWLTGKLDGRRVRLGGDETTGRGAVVLRVARV
>Mature_306_residues
AEASALLFAYCETPVHAGTGRAVGTVDLPIQRERITGFPIAQASSVKGVLRATTQANGADAERHRALFGPDRPEEASTHA
GALQVTDLQVVLFPVRSLAGVFAWTTSPAVLARLVRLAKLAGIEGPVDPTRFAGLQPGQCAVANGSALLTPAGQQVGVVL
EEYSFTLAGELAGLVSALAEWLVALALPQTPEYAWWRENLAKHLCVLPDDEFRDFVLYATEIEAHVRLKDETKTVEPGAL
WTTETLPAETLLVGLLATTRSRYDKVNEDGRALLGWLTGKLDGRRVRLGGDETTGRGAVVLRVARV

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32853; Mature: 32722

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEASALLFAYCETPVHAGTGRAVGTVDLPIQRERITGFPIAQASSVKGVLRATTQANGA
CCCHHEEEEEEECCCCCCCCCCEEEEEECCEEHHHCCCCCCCCCHHHHHHHHHHCCCCCC
DAERHRALFGPDRPEEASTHAGALQVTDLQVVLFPVRSLAGVFAWTTSPAVLARLVRLAK
CHHHHHCCCCCCCCCCCCCCCCEEEEECHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAGIEGPVDPTRFAGLQPGQCAVANGSALLTPAGQQVGVVLEEYSFTLAGELAGLVSALA
HHCCCCCCCHHHHCCCCCCCEEEECCCEEECCCCCHHEEEEECCCHHHHHHHHHHHHHHH
EWLVALALPQTPEYAWWRENLAKHLCVLPDDEFRDFVLYATEIEAHVRLKDETKTVEPGA
HHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCC
LWTTETLPAETLLVGLLATTRSRYDKVNEDGRALLGWLTGKLDGRRVRLGGDETTGRGAV
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHCCCCCCEEEECCCCCCCCCEE
VLRVARV
EEEEECC
>Mature Secondary Structure 
AEASALLFAYCETPVHAGTGRAVGTVDLPIQRERITGFPIAQASSVKGVLRATTQANGA
CCHHEEEEEEECCCCCCCCCCEEEEEECCEEHHHCCCCCCCCCHHHHHHHHHHCCCCCC
DAERHRALFGPDRPEEASTHAGALQVTDLQVVLFPVRSLAGVFAWTTSPAVLARLVRLAK
CHHHHHCCCCCCCCCCCCCCCCEEEEECHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHHH
LAGIEGPVDPTRFAGLQPGQCAVANGSALLTPAGQQVGVVLEEYSFTLAGELAGLVSALA
HHCCCCCCCHHHHCCCCCCCEEEECCCEEECCCCCHHEEEEECCCHHHHHHHHHHHHHHH
EWLVALALPQTPEYAWWRENLAKHLCVLPDDEFRDFVLYATEIEAHVRLKDETKTVEPGA
HHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCC
LWTTETLPAETLLVGLLATTRSRYDKVNEDGRALLGWLTGKLDGRRVRLGGDETTGRGAV
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHCCCCCCEEEECCCCCCCCCEE
VLRVARV
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA