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The map label for this gene is ybfB [H]

Identifier: 221635498

GI number: 221635498

Start: 80919

End: 82190

Strand: Reverse

Name: ybfB [H]

Synonym: trd_A0092

Alternate gene names: 221635498

Gene position: 82190-80919 (Counterclockwise)

Preceding gene: 221635499

Following gene: 221635496

Centisome position: 8.96

GC content: 68.63

Gene sequence:

>1272_bases
GTGCATCGCCACCAACGTGATAAGGGCTATGCCTGGGTGATCGTGGCCACGCTCGCGCTGACCGAGACCGTCTCCTGGGG
CGTTCTCTACTATGGTTTCGCGGTCTTTCTCGTCCCGATGGAGCAAGCGTTCGGCTGGTCGCGTGCGCAATTGACTGGCG
CCTTCTCGCTCGCTCTGCTCCTTTCCGGCTTCGTCGCGCCACTGGTCGGGCGCTGGCTCGATCAGCGAGGTCCACGCCTT
CCCATGACGTTCGGCTCCCTCGCAGCGACGCTGCTCCTCCTGGCCTGGTCGCGTATCACCCAGTTGGCCGCGTTCTATGC
TGTGTGGGCAGGGCTCGGCCTCGTCATGGCCCTGGTGCTCTACGAGCCTGCTTTCGCGACGATCGCGAAGTGGTTCGAGC
GTCGCCGGCGCCAGGCGCTCACCGTGCTCACGCTCGTGGGCGCCTTGGCCAGCGTCATCTTCACCCCGTTCATCACCTGG
CTCATCGCGCTCCTGGGCTGGCGCACTGCCCTCCTCGTCCTGGCTGGACTGCTCGCGCTGACGACCGTGCTCCCGCACGC
CCTTCTGCTCCGCGCTCCACCACGCGAGCCGATCTCCCCCCGACCTCGGGCAGCGACGAACGCTCGTGCCGCCCTGCGGA
CTCTTCCCTTCTGGGCACTCACGGCAGCCCTCACCCTGGCAGCCTTCGTCACCGTGACCGTTACGGTGCATCTCCTCCCC
TCGCTGCTCGACCGCGGCTATACGCCCGCCTTCGCTGCCTCCGCAACCGGACTGGTCGGCCTCATGCAGATCCCGGGTCG
GCTCCTCATCGCGCCGCTCGGTCGCTGGCTCTCCGACCGCGTCCTCACTACGCTCGTCTTCCTCGTCCAGGGAGGTGCAC
TGCTGCTCTTGCTCGTGGCTGGCCACCGCGCGGCCGGGGTACTCGCCTTCGTCGTCCTCTTCGGCATGGCGAACGGGATG
ATCACGATCGTGCGAGCGGCTCGCCCCGCCGAGTTGTTCGGCAGTGCTGCCTACGGTGCGATCGCCGGGGCCATGACCCT
GCCCGTCACGCTCGCTCGTGCAGCTGCGCCGTTCGGGGCCGGTCTCCTCTACACGGCCCTCGGCCGCTACCAGCCGATCT
GGCTGGCGCTCGTGGTGGTCGGAGCGCTCTCGGCTGGCGCTGCCTGCCTGGCCGAGACCGCTGCCTGCCGCTCGCTGCTC
GGTTCCGCTCGCTCACCCCAGACGGAGGAGCGCCTCCCGCTGGAACGAGCGTCGACCGACGCGCAGGAGTAA

Upstream 100 bases:

>100_bases
GACCCGTTGTCCCTCTCGCTCGAACCAGCGCCTTCGCACGACCTCGAGTCTGGTCTCTCAGCACTGCGTTCGTGGAGCGG
CGATCGGAGGAGAAAGCACA

Downstream 100 bases:

>100_bases
GGCTGCGATCCCCCAGATCACCAGAGATCCGGCTAGCGCCAGCCGCCAGTCGAGCAAGAAGAGTCCACTCCCTTGCGCGA
CGATCAAGCCGATGAGCGGG

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MHRHQRDKGYAWVIVATLALTETVSWGVLYYGFAVFLVPMEQAFGWSRAQLTGAFSLALLLSGFVAPLVGRWLDQRGPRL
PMTFGSLAATLLLLAWSRITQLAAFYAVWAGLGLVMALVLYEPAFATIAKWFERRRRQALTVLTLVGALASVIFTPFITW
LIALLGWRTALLVLAGLLALTTVLPHALLLRAPPREPISPRPRAATNARAALRTLPFWALTAALTLAAFVTVTVTVHLLP
SLLDRGYTPAFAASATGLVGLMQIPGRLLIAPLGRWLSDRVLTTLVFLVQGGALLLLLVAGHRAAGVLAFVVLFGMANGM
ITIVRAARPAELFGSAAYGAIAGAMTLPVTLARAAAPFGAGLLYTALGRYQPIWLALVVVGALSAGAACLAETAACRSLL
GSARSPQTEERLPLERASTDAQE

Sequences:

>Translated_423_residues
MHRHQRDKGYAWVIVATLALTETVSWGVLYYGFAVFLVPMEQAFGWSRAQLTGAFSLALLLSGFVAPLVGRWLDQRGPRL
PMTFGSLAATLLLLAWSRITQLAAFYAVWAGLGLVMALVLYEPAFATIAKWFERRRRQALTVLTLVGALASVIFTPFITW
LIALLGWRTALLVLAGLLALTTVLPHALLLRAPPREPISPRPRAATNARAALRTLPFWALTAALTLAAFVTVTVTVHLLP
SLLDRGYTPAFAASATGLVGLMQIPGRLLIAPLGRWLSDRVLTTLVFLVQGGALLLLLVAGHRAAGVLAFVVLFGMANGM
ITIVRAARPAELFGSAAYGAIAGAMTLPVTLARAAAPFGAGLLYTALGRYQPIWLALVVVGALSAGAACLAETAACRSLL
GSARSPQTEERLPLERASTDAQE
>Mature_423_residues
MHRHQRDKGYAWVIVATLALTETVSWGVLYYGFAVFLVPMEQAFGWSRAQLTGAFSLALLLSGFVAPLVGRWLDQRGPRL
PMTFGSLAATLLLLAWSRITQLAAFYAVWAGLGLVMALVLYEPAFATIAKWFERRRRQALTVLTLVGALASVIFTPFITW
LIALLGWRTALLVLAGLLALTTVLPHALLLRAPPREPISPRPRAATNARAALRTLPFWALTAALTLAAFVTVTVTVHLLP
SLLDRGYTPAFAASATGLVGLMQIPGRLLIAPLGRWLSDRVLTTLVFLVQGGALLLLLVAGHRAAGVLAFVVLFGMANGM
ITIVRAARPAELFGSAAYGAIAGAMTLPVTLARAAAPFGAGLLYTALGRYQPIWLALVVVGALSAGAACLAETAACRSLL
GSARSPQTEERLPLERASTDAQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=435, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI292781289, Length=208, Percent_Identity=26.4423076923077, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI40789261, Length=208, Percent_Identity=26.4423076923077, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI291621700, Length=308, Percent_Identity=24.6753246753247, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45081; Mature: 45081

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRHQRDKGYAWVIVATLALTETVSWGVLYYGFAVFLVPMEQAFGWSRAQLTGAFSLALL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LSGFVAPLVGRWLDQRGPRLPMTFGSLAATLLLLAWSRITQLAAFYAVWAGLGLVMALVL
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEPAFATIAKWFERRRRQALTVLTLVGALASVIFTPFITWLIALLGWRTALLVLAGLLAL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTVLPHALLLRAPPREPISPRPRAATNARAALRTLPFWALTAALTLAAFVTVTVTVHLLP
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLDRGYTPAFAASATGLVGLMQIPGRLLIAPLGRWLSDRVLTTLVFLVQGGALLLLLVA
HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GHRAAGVLAFVVLFGMANGMITIVRAARPAELFGSAAYGAIAGAMTLPVTLARAAAPFGA
CCHHHHHHHHHHHHHHCCCCEEHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH
GLLYTALGRYQPIWLALVVVGALSAGAACLAETAACRSLLGSARSPQTEERLPLERASTD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHCCCC
AQE
CCC
>Mature Secondary Structure
MHRHQRDKGYAWVIVATLALTETVSWGVLYYGFAVFLVPMEQAFGWSRAQLTGAFSLALL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LSGFVAPLVGRWLDQRGPRLPMTFGSLAATLLLLAWSRITQLAAFYAVWAGLGLVMALVL
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEPAFATIAKWFERRRRQALTVLTLVGALASVIFTPFITWLIALLGWRTALLVLAGLLAL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTVLPHALLLRAPPREPISPRPRAATNARAALRTLPFWALTAALTLAAFVTVTVTVHLLP
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLDRGYTPAFAASATGLVGLMQIPGRLLIAPLGRWLSDRVLTTLVFLVQGGALLLLLVA
HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GHRAAGVLAFVVLFGMANGMITIVRAARPAELFGSAAYGAIAGAMTLPVTLARAAAPFGA
CCHHHHHHHHHHHHHHCCCCEEHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCH
GLLYTALGRYQPIWLALVVVGALSAGAACLAETAACRSLLGSARSPQTEERLPLERASTD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHCCCC
AQE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]