Click here to switch to the map view.

The map label for this gene is 221635496

Identifier: 221635496

GI number: 221635496

Start: 78420

End: 78977

Strand: Reverse

Name: 221635496

Synonym: trd_A0090

Alternate gene names: NA

Gene position: 78977-78420 (Counterclockwise)

Preceding gene: 221635498

Following gene: 221635495

Centisome position: 8.61

GC content: 63.08

Gene sequence:

>558_bases
ATGGACCGTCCGCGGATGGAACAACGACGATTCGAGGTGAGCCCGCTGATCATCGCTCTGGCAGGCGTGATGATCGCGGT
CGTCTTCGTGGCGACGCGCTTCATTCAGGTCCCGATCCCCAGCGGATACATCCATTTGGGGGATATCGCCATCTACACCG
GTGCGTTCCTCTTCGGTCCGATCGTGGGTGGCGTCAGCGGCGCCCTCGGTCCCATGCTCGCTGACTTGACCAGTGGCTAT
GGTCAGTACGCTCCGGCGACGCTCGTGCTGCACGGGCTGCAAGGTTTCCTGGCTGGATGGATCGGCTGGCGAGCTGGTTT
CTGGCGCATGGTTCTCGCGACGATCTTGGGCGGCGTGATCATCGTCGCCGGGTACTTCCTGTGGGAGATCGCTGTCCTGC
GCATCGGGTTGGTGACCGCCACGGCGAATCTCCCCTTCAATATCTGGCAGGTGACCACCGGTGCCATCGGCGGCATCGCA
CTCACGGTCTTCTTCCGTCGGACTTATGCGGTCGTGCTGACCCAGCTTCGGCCGGCCCGTTTCCGCCGCGAAGCGTAA

Upstream 100 bases:

>100_bases
ACCCCTCGCGGCTGGCTGGATTGGATGGTGCTGATTGGCTGTTGCCAAAGCGCTCGTCGTGACCCAGGCTTCGGGGTAGC
CTGAGAGAGGAGGGGAAGAT

Downstream 100 bases:

>100_bases
ACGGTCCGCTACGCGGTGAGCCGGTACAGTCATGCCGAGCGGCTGATCGGATCGAGCTGGCATGCAGAGTGACCCGCACT
CGCTGGCCGACGGATGTCAG

Product: membrane spanning protein

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDRPRMEQRRFEVSPLIIALAGVMIAVVFVATRFIQVPIPSGYIHLGDIAIYTGAFLFGPIVGGVSGALGPMLADLTSGY
GQYAPATLVLHGLQGFLAGWIGWRAGFWRMVLATILGGVIIVAGYFLWEIAVLRIGLVTATANLPFNIWQVTTGAIGGIA
LTVFFRRTYAVVLTQLRPARFRREA

Sequences:

>Translated_185_residues
MDRPRMEQRRFEVSPLIIALAGVMIAVVFVATRFIQVPIPSGYIHLGDIAIYTGAFLFGPIVGGVSGALGPMLADLTSGY
GQYAPATLVLHGLQGFLAGWIGWRAGFWRMVLATILGGVIIVAGYFLWEIAVLRIGLVTATANLPFNIWQVTTGAIGGIA
LTVFFRRTYAVVLTQLRPARFRREA
>Mature_185_residues
MDRPRMEQRRFEVSPLIIALAGVMIAVVFVATRFIQVPIPSGYIHLGDIAIYTGAFLFGPIVGGVSGALGPMLADLTSGY
GQYAPATLVLHGLQGFLAGWIGWRAGFWRMVLATILGGVIIVAGYFLWEIAVLRIGLVTATANLPFNIWQVTTGAIGGIA
LTVFFRRTYAVVLTQLRPARFRREA

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 20066; Mature: 20066

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPRMEQRRFEVSPLIIALAGVMIAVVFVATRFIQVPIPSGYIHLGDIAIYTGAFLFGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHH
IVGGVSGALGPMLADLTSGYGQYAPATLVLHGLQGFLAGWIGWRAGFWRMVLATILGGVI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGYFLWEIAVLRIGLVTATANLPFNIWQVTTGAIGGIALTVFFRRTYAVVLTQLRPAR
HHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCHHH
FRREA
HCCCC
>Mature Secondary Structure
MDRPRMEQRRFEVSPLIIALAGVMIAVVFVATRFIQVPIPSGYIHLGDIAIYTGAFLFGP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHH
IVGGVSGALGPMLADLTSGYGQYAPATLVLHGLQGFLAGWIGWRAGFWRMVLATILGGVI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGYFLWEIAVLRIGLVTATANLPFNIWQVTTGAIGGIALTVFFRRTYAVVLTQLRPAR
HHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCHHH
FRREA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2165475 [H]