The gene/protein map for NC_008344 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635416

Identifier: 221635416

GI number: 221635416

Start: 10006

End: 10329

Strand: Reverse

Name: 221635416

Synonym: trd_A0010

Alternate gene names: NA

Gene position: 10329-10006 (Counterclockwise)

Preceding gene: 221635418

Following gene: 221635412

Centisome position: 1.13

GC content: 66.36

Gene sequence:

>324_bases
ATGCCGGGAACTCCCGTGCTGGCGCAGGCGCGCTCGATCACCTCCCGAAGGTCGCTCGTCGTTCTCATCGGCTATTCCTC
CCTCGCTCGCTTCCCCGGTCAGCTTCGCGCTCGGCAGGGCTTCTGGCAAGGGCTCTCGCTTCTGATCCGCGCTGCGCACG
GATCGCTCAGGTGGATGCCGATCAGCGACTCTTTGTCGTTCACGTGGTCGAGCAGCCTGTTCAGCGACGAGCGGAGCAGC
CGACGCCCCGCGCGCGGCTGCTCACTGGCCTACCAGATGGATCGGGTATCGACCTCTTCCAGCCCGGGGATGACCAGGCC
GTGA

Upstream 100 bases:

>100_bases
CTGGAACAGCGTGTCGCGTCGCACGGGGCAACCGGTTTCCAGGCTGGCGACCCCGTGTGTCACCACCTCGCGCCCGTCGG
GTGTCAGGATCCCGATCACC

Downstream 100 bases:

>100_bases
CCAGTGTCGAGATGAGGTGCGGATCTTCGCACCGGAAAAGCGGCACTCGTTTCGGCGACCGAGCGTGCGCGCGGTGCTTC
TTCCACCCGCCGGTTGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPGTPVLAQARSITSRRSLVVLIGYSSLARFPGQLRARQGFWQGLSLLIRAAHGSLRWMPISDSLSFTWSSSLFSDERSS
RRPARGCSLAYQMDRVSTSSSPGMTRP

Sequences:

>Translated_107_residues
MPGTPVLAQARSITSRRSLVVLIGYSSLARFPGQLRARQGFWQGLSLLIRAAHGSLRWMPISDSLSFTWSSSLFSDERSS
RRPARGCSLAYQMDRVSTSSSPGMTRP
>Mature_106_residues
PGTPVLAQARSITSRRSLVVLIGYSSLARFPGQLRARQGFWQGLSLLIRAAHGSLRWMPISDSLSFTWSSSLFSDERSSR
RPARGCSLAYQMDRVSTSSSPGMTRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11805; Mature: 11673

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTPVLAQARSITSRRSLVVLIGYSSLARFPGQLRARQGFWQGLSLLIRAAHGSLRWMP
CCCCCHHHHHHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ISDSLSFTWSSSLFSDERSSRRPARGCSLAYQMDRVSTSSSPGMTRP
CCCCCCEEECCHHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PGTPVLAQARSITSRRSLVVLIGYSSLARFPGQLRARQGFWQGLSLLIRAAHGSLRWMP
CCCCHHHHHHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ISDSLSFTWSSSLFSDERSSRRPARGCSLAYQMDRVSTSSSPGMTRP
CCCCCCEEECCHHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA