| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is kefB [C]
Identifier: 221633949
GI number: 221633949
Start: 1995654
End: 1996862
Strand: Reverse
Name: kefB [C]
Synonym: trd_1977
Alternate gene names: 221633949
Gene position: 1996862-1995654 (Counterclockwise)
Preceding gene: 221633952
Following gene: 221633948
Centisome position: 99.69
GC content: 62.12
Gene sequence:
>1209_bases ATGGCAAACATCTGGGCCACTGCCGCACTCTGGATCGGACTCGCATTTTTGGCGAGCATCATCTCCATTCGCCTCGGACT GTCCGTCGCACTCGTCGAGATCCTGGTCGGTATCGTCGCCGGGAATACGCTCGGCCTCCAGACCGATACCTGGATCAATG CGCTCGCCAGTTTTGGGGCGGTCGTCCTCACCTTCCTCGCCGGGGCGGAGATCGAGCCGGAAGCCCTGCGCCGGCACCTC AAGGCGAGTCTCGCGATCGGCTTCGCTGGATTCCTCGCGCCGTTTCTCGGTGCCACCGCCTTCACACGCTTCGTCGCGGG TTGGAGCTGGCCACAAGCCTGGATCGGTGGCCTCGCTCTCTCCACCACTTCGGTCGCCGTCGTCTATGCGGTGATGGTGG AAACCGGACTGAACGAGACCGACATCGGCAAGTTGATCCTGGCCGCCTGCTTCGTCAACGACTTGGGCACGGTTCTCGCA TTGGGGCTTCTCTTTGCGAACTATGACCTGCACCTCGTGGTTTTCGTCGTCGTCACGGCAGTCACGCTCTTCCTGCTCGG GCGAGTGACACGATTCGTGATCGCAGCGTGGGGAAACCGCGTCAGCGAGCCAGAAGTCAAATTCCTGCTCCTGGTACTCT TCTTCCTCGGTTGGCTGGCGACGATCGCCAAGAGCGAAGCTGTTCTGCCAGCGTACTTGGTCGGCCTGGCCATCGCTGAG ATTTTCACGCATCATCGCCCACTCATGCTGCGCCTGCGTACCCTGGCCTTCGCTCTGCTCACGCCATGGTACTTCCTCAA GGCAGGCTTGTACGTTTCCCTGCCAGCGCTCGTCAGCAGTATCGGGTTGATCGTCGCGCTGCTCTTGGTCAAGATGGTCA CGAAGCTTCTCGGAGTCGGACCCTTGACGCTCGTCTTCGGGCTCGAGCGGCGCACGAGCGCCTATACCACCCTGCTGATG TCGACAGGCCTGACTTTTGGTACTATTTCCGCACTCTTCGGCCTCAACAACGGCATCATCGACCGCACCCAGTACACTGC ACTGGTGACCGCGGTGATCGCCTCCGCGTTGGTACCCACGTGGATCGCACAGACCTGGTTCCTGCCACGCACCGAGGAGA CGCCGCGCGCCCCGGCCGACACCGCGGCACCTCTGCCTGGAGTGGAGACGGAACTCGTCGCCGAGCGAGCGACACGAGAG GACGGTTGA
Upstream 100 bases:
>100_bases GAAGGCTGATGGCTCCTGCTCGCAGGACGTGCGGGCAGGAGTTTTTCTTCTGCCCCCGTCCTCGAAAACTGCGAACGGAA CGAGCGGGAAGGGGGCATCG
Downstream 100 bases:
>100_bases GCGATGTACCGCAAAATTCTCGTCGGATTCGATGGTTCACCAGGGGCACAGGCGGCCCTGCGCCACGCCATCGAGCTGGC GCGCCTGTTCGGGGCTGAAT
Product: Kef-type K+ transport systems, membrane components
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MANIWATAALWIGLAFLASIISIRLGLSVALVEILVGIVAGNTLGLQTDTWINALASFGAVVLTFLAGAEIEPEALRRHL KASLAIGFAGFLAPFLGATAFTRFVAGWSWPQAWIGGLALSTTSVAVVYAVMVETGLNETDIGKLILAACFVNDLGTVLA LGLLFANYDLHLVVFVVVTAVTLFLLGRVTRFVIAAWGNRVSEPEVKFLLLVLFFLGWLATIAKSEAVLPAYLVGLAIAE IFTHHRPLMLRLRTLAFALLTPWYFLKAGLYVSLPALVSSIGLIVALLLVKMVTKLLGVGPLTLVFGLERRTSAYTTLLM STGLTFGTISALFGLNNGIIDRTQYTALVTAVIASALVPTWIAQTWFLPRTEETPRAPADTAAPLPGVETELVAERATRE DG
Sequences:
>Translated_402_residues MANIWATAALWIGLAFLASIISIRLGLSVALVEILVGIVAGNTLGLQTDTWINALASFGAVVLTFLAGAEIEPEALRRHL KASLAIGFAGFLAPFLGATAFTRFVAGWSWPQAWIGGLALSTTSVAVVYAVMVETGLNETDIGKLILAACFVNDLGTVLA LGLLFANYDLHLVVFVVVTAVTLFLLGRVTRFVIAAWGNRVSEPEVKFLLLVLFFLGWLATIAKSEAVLPAYLVGLAIAE IFTHHRPLMLRLRTLAFALLTPWYFLKAGLYVSLPALVSSIGLIVALLLVKMVTKLLGVGPLTLVFGLERRTSAYTTLLM STGLTFGTISALFGLNNGIIDRTQYTALVTAVIASALVPTWIAQTWFLPRTEETPRAPADTAAPLPGVETELVAERATRE DG >Mature_401_residues ANIWATAALWIGLAFLASIISIRLGLSVALVEILVGIVAGNTLGLQTDTWINALASFGAVVLTFLAGAEIEPEALRRHLK ASLAIGFAGFLAPFLGATAFTRFVAGWSWPQAWIGGLALSTTSVAVVYAVMVETGLNETDIGKLILAACFVNDLGTVLAL GLLFANYDLHLVVFVVVTAVTLFLLGRVTRFVIAAWGNRVSEPEVKFLLLVLFFLGWLATIAKSEAVLPAYLVGLAIAEI FTHHRPLMLRLRTLAFALLTPWYFLKAGLYVSLPALVSSIGLIVALLLVKMVTKLLGVGPLTLVFGLERRTSAYTTLLMS TGLTFGTISALFGLNNGIIDRTQYTALVTAVIASALVPTWIAQTWFLPRTEETPRAPADTAAPLPGVETELVAERATRED G
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 42981; Mature: 42850
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIWATAALWIGLAFLASIISIRLGLSVALVEILVGIVAGNTLGLQTDTWINALASFGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VVLTFLAGAEIEPEALRRHLKASLAIGFAGFLAPFLGATAFTRFVAGWSWPQAWIGGLAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH STTSVAVVYAVMVETGLNETDIGKLILAACFVNDLGTVLALGLLFANYDLHLVVFVVVTA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VTLFLLGRVTRFVIAAWGNRVSEPEVKFLLLVLFFLGWLATIAKSEAVLPAYLVGLAIAE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IFTHHRPLMLRLRTLAFALLTPWYFLKAGLYVSLPALVSSIGLIVALLLVKMVTKLLGVG HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLTLVFGLERRTSAYTTLLMSTGLTFGTISALFGLNNGIIDRTQYTALVTAVIASALVPT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WIAQTWFLPRTEETPRAPADTAAPLPGVETELVAERATREDG HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure ANIWATAALWIGLAFLASIISIRLGLSVALVEILVGIVAGNTLGLQTDTWINALASFGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VVLTFLAGAEIEPEALRRHLKASLAIGFAGFLAPFLGATAFTRFVAGWSWPQAWIGGLAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH STTSVAVVYAVMVETGLNETDIGKLILAACFVNDLGTVLALGLLFANYDLHLVVFVVVTA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VTLFLLGRVTRFVIAAWGNRVSEPEVKFLLLVLFFLGWLATIAKSEAVLPAYLVGLAIAE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IFTHHRPLMLRLRTLAFALLTPWYFLKAGLYVSLPALVSSIGLIVALLLVKMVTKLLGVG HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLTLVFGLERRTSAYTTLLMSTGLTFGTISALFGLNNGIIDRTQYTALVTAVIASALVPT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WIAQTWFLPRTEETPRAPADTAAPLPGVETELVAERATREDG HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]