| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633942
Identifier: 221633942
GI number: 221633942
Start: 1988031
End: 1988228
Strand: Reverse
Name: 221633942
Synonym: trd_1970
Alternate gene names: NA
Gene position: 1988228-1988031 (Counterclockwise)
Preceding gene: 221633944
Following gene: 221633941
Centisome position: 99.26
GC content: 60.61
Gene sequence:
>198_bases GTGCTCTTCAACCGCTTCGACTCCACGACGCCAGAGAAACCGGCTGGGGGCATCCGGATCGAGACAGAGGAGAGAACCGT TTTCGATTCCTCGCGAAAACGCTCACCGTGTCTCGTTGCCGAAGGAGACGATGGCCGCTCAGCGTCAGGTGAGCGTTTTC CGAGTCCGGTCCTTCGCTCCTCCACTCCCTCGCTCTGA
Upstream 100 bases:
>100_bases TAGAGCTCCAGTCGCGTCGTCATGATCGCTCCCTCCGTAGCGACCGCACCGAGTGTCCCCGATCGTTCGAGTCACCCGTG AGGACGAGCGCTACCAATGC
Downstream 100 bases:
>100_bases CCGCCCTTTAGGAGTCGAAGGCGATAGCACTCGTGAACGATACCACGTGAGAACGCAACCGTGAACAGTGCGACGATAGC GCTTCCGGTGTACCAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MLFNRFDSTTPEKPAGGIRIETEERTVFDSSRKRSPCLVAEGDDGRSASGERFPSPVLRSSTPSL
Sequences:
>Translated_65_residues MLFNRFDSTTPEKPAGGIRIETEERTVFDSSRKRSPCLVAEGDDGRSASGERFPSPVLRSSTPSL >Mature_65_residues MLFNRFDSTTPEKPAGGIRIETEERTVFDSSRKRSPCLVAEGDDGRSASGERFPSPVLRSSTPSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7130; Mature: 7130
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFNRFDSTTPEKPAGGIRIETEERTVFDSSRKRSPCLVAEGDDGRSASGERFPSPVLRS CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC STPSL CCCCC >Mature Secondary Structure MLFNRFDSTTPEKPAGGIRIETEERTVFDSSRKRSPCLVAEGDDGRSASGERFPSPVLRS CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC STPSL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA