| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is minC [H]
Identifier: 221633899
GI number: 221633899
Start: 1935709
End: 1936416
Strand: Reverse
Name: minC [H]
Synonym: trd_1926
Alternate gene names: 221633899
Gene position: 1936416-1935709 (Counterclockwise)
Preceding gene: 221633900
Following gene: 221633898
Centisome position: 96.68
GC content: 69.92
Gene sequence:
>708_bases ATGCTCGACGACGAACGAGCACGAGCGACGGTCCGCGTGCGTGGAACCCAGGACGGCGTCCGCCTCCTGTTGCCGCGCGC CACCCCCCTCGCGGTGGTGCTCGAGCAGGTCCGCGATCTCCTCGAGTCACGGTCCAGCTTCTTCCGCGGTGCCGCCTTGA CGCTCGACTTTTCCGAACGGGAGCCGGTCCTGGACGAGATCGCTGCGCTCCAGCAGCTCCTCGATCGCCACGGAATCCGG ATCCAGGCGATCGGTGCCGCCACCAGTGACGTGCGCCAGCGGCTGGAGCGCTGGGGATTCCGCACGGAGACCGCCGAACC AGCCCGCCGCTTGCGCCTGATCGAGCCGGACAGCGAACAAACTCCCGATGGAAGCGCGACCTATCTCCGCCGGACGCTCC GCTCCGGCATGTCGGTCGAAGCCGAGGGGCATCTCGTCCTGATCGGGGACGTCAATCCGGGCGCGCTGGTGGTCGCCGGC GGGGACGTCCTGGTCTGGGGCGTGGTGCGCGGGACGGTCCATGCCGGACGACACGGCGACACCGACGCCGTCATCGCGGC GCTCCGCCTGGCGCCGATGCAGCTGCGGATCGCCAATCTGGTGGCCCGCGCACCTGATCGCGGCGGGCAGCTCTTGGATG CGCCAGCCTTGGCACGGGTGGTCGATGGGCAGATCGTGATCGAGCCCTGGCGGATCGAACGACGCTAG
Upstream 100 bases:
>100_bases TGGGGGAGAGGGCGCGACCTTCGCTGTCCCGGTCGCTGACCGGATCCTGGCGACCTACTTCGGACGGATCAGCCCGGAAA CAGGAGCGAGAGGGTAGGCG
Downstream 100 bases:
>100_bases CCTGGTAGTGCGCCAGGAGGAGGGGTGCGGTGGAGGAACAGCAGGATCGCAACGGCCGGGTCATCACCATCACCTCGGGC AAGGGTGGAGTCGGCAAGAC
Product: septum site-determining protein MinC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLDDERARATVRVRGTQDGVRLLLPRATPLAVVLEQVRDLLESRSSFFRGAALTLDFSEREPVLDEIAALQQLLDRHGIR IQAIGAATSDVRQRLERWGFRTETAEPARRLRLIEPDSEQTPDGSATYLRRTLRSGMSVEAEGHLVLIGDVNPGALVVAG GDVLVWGVVRGTVHAGRHGDTDAVIAALRLAPMQLRIANLVARAPDRGGQLLDAPALARVVDGQIVIEPWRIERR
Sequences:
>Translated_235_residues MLDDERARATVRVRGTQDGVRLLLPRATPLAVVLEQVRDLLESRSSFFRGAALTLDFSEREPVLDEIAALQQLLDRHGIR IQAIGAATSDVRQRLERWGFRTETAEPARRLRLIEPDSEQTPDGSATYLRRTLRSGMSVEAEGHLVLIGDVNPGALVVAG GDVLVWGVVRGTVHAGRHGDTDAVIAALRLAPMQLRIANLVARAPDRGGQLLDAPALARVVDGQIVIEPWRIERR >Mature_235_residues MLDDERARATVRVRGTQDGVRLLLPRATPLAVVLEQVRDLLESRSSFFRGAALTLDFSEREPVLDEIAALQQLLDRHGIR IQAIGAATSDVRQRLERWGFRTETAEPARRLRLIEPDSEQTPDGSATYLRRTLRSGMSVEAEGHLVLIGDVNPGALVVAG GDVLVWGVVRGTVHAGRHGDTDAVIAALRLAPMQLRIANLVARAPDRGGQLLDAPALARVVDGQIVIEPWRIERR
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization [H]
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR007874 - InterPro: IPR005526 [H]
Pfam domain/function: PF03775 MinC_C; PF05209 MinC_N [H]
EC number: NA
Molecular weight: Translated: 25788; Mature: 25788
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDERARATVRVRGTQDGVRLLLPRATPLAVVLEQVRDLLESRSSFFRGAALTLDFSER CCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC EPVLDEIAALQQLLDRHGIRIQAIGAATSDVRQRLERWGFRTETAEPARRLRLIEPDSEQ CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCCC TPDGSATYLRRTLRSGMSVEAEGHLVLIGDVNPGALVVAGGDVLVWGVVRGTVHAGRHGD CCCCHHHHHHHHHHCCCCEECCCCEEEEECCCCCEEEEECCCEEEEEEHHHHEECCCCCC TDAVIAALRLAPMQLRIANLVARAPDRGGQLLDAPALARVVDGQIVIEPWRIERR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure MLDDERARATVRVRGTQDGVRLLLPRATPLAVVLEQVRDLLESRSSFFRGAALTLDFSER CCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC EPVLDEIAALQQLLDRHGIRIQAIGAATSDVRQRLERWGFRTETAEPARRLRLIEPDSEQ CCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCCC TPDGSATYLRRTLRSGMSVEAEGHLVLIGDVNPGALVVAGGDVLVWGVVRGTVHAGRHGD CCCCHHHHHHHHHHCCCCEECCCCEEEEECCCCCEEEEECCCEEEEEEHHHHEECCCCCC TDAVIAALRLAPMQLRIANLVARAPDRGGQLLDAPALARVVDGQIVIEPWRIERR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA