Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is yfbT [C]

Identifier: 221633862

GI number: 221633862

Start: 1897894

End: 1898562

Strand: Reverse

Name: yfbT [C]

Synonym: trd_1888

Alternate gene names: 221633862

Gene position: 1898562-1897894 (Counterclockwise)

Preceding gene: 221633866

Following gene: 221633860

Centisome position: 94.79

GC content: 68.01

Gene sequence:

>669_bases
ATGAGCCGAGACGACCGTGGTGTTCTTTTCGATCTGGACGGTGTCCTCATCGACAGCGAGCAGGCGCATTTCGAGGCCAC
GCGCCAGGCGTTCCGTCACCTGCGCCTTCCCGAACTCACCGAAGACCTCTACCGAAGCCAGATGATCGGCCGACCTGACC
GGGAAGCGATCGCGGCGGCGATGCACGCGCTCGGCATCCCCGCCAGCTGGCTCGAACCGGTTCTGGAAAGCAAAGCAGAC
TTCTATCAGGAACTCTTGGCCGCAGGTCGCGTCGACCTCTTGACCGATGGGATCGCCGCAGTACACGCCGCGCTCGAGGC
TGGTTATCCGGTCGCTCTCGTCACCGGAGCGCTGGCTGTCGAGGCGCACTGGGCACTCCGCGCCGCTGGCCTGATGGGCC
GGATCACGACGGTCGTCACGGCAGAGGACGTCCGCGCCGGGAAACCGGACCCAGAGCCGTATCGCACCGCCTGCAGCCGG
CTCGGGGTCGCGCCCGGACGGAGCGTCGCTGTCGAGGACTCGCCAGCTGGAGTCGCGGCGGGACGCGCAGCAGGGTTGCG
CGTCCTGGCCGTCGCCCGCCAGCCCTTCCCCGAACTCGCCGCAGCCGATCGGGTCGTTACCGTCCTCTCCTGGGAAGCGA
TCGCCGACCTGTTGGCTCGCTCACGCTAG

Upstream 100 bases:

>100_bases
GCGGTCGTCATCGTCCATCTCCTCGCTTTCGAGCGCCGTCGCGTTGCGCTCGAAAACAAGTATGCTGGACTCGGCACGAG
CGCGTGCAGGGAGTGGATGC

Downstream 100 bases:

>100_bases
CTTGCCAACTCTGCCAGTTTGCGAGCCAGCGCGATGTCGCGCTCGGTAATTCCCCCTGCTTCGTGGGTGGTGAGCAGCAA
ATGCACGCGGTTGTACCGAA

Product: hydrolase

Products: beta-D-glucose 6-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAAMHALGIPASWLEPVLESKAD
FYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAVEAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSR
LGVAPGRSVAVEDSPAGVAAGRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR

Sequences:

>Translated_222_residues
MSRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAAMHALGIPASWLEPVLESKAD
FYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAVEAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSR
LGVAPGRSVAVEDSPAGVAAGRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR
>Mature_221_residues
SRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAAMHALGIPASWLEPVLESKADF
YQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAVEAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSRL
GVAPGRSVAVEDSPAGVAAGRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR

Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082080, Length=214, Percent_Identity=34.5794392523364, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787576, Length=190, Percent_Identity=26.3157894736842, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789046, Length=197, Percent_Identity=28.4263959390863, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 5.4.2.6

Molecular weight: Translated: 23680; Mature: 23549

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAA
CCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
MHALGIPASWLEPVLESKADFYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSRLGVAPGRSVAVEDSPAGVAA
HHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHH
GRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAA
CCCCCCEEEECCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
MHALGIPASWLEPVLESKADFYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSRLGVAPGRSVAVEDSPAGVAA
HHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHH
GRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-D-glucose 1-phosphate

Specific reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]