| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is yfbT [C]
Identifier: 221633862
GI number: 221633862
Start: 1897894
End: 1898562
Strand: Reverse
Name: yfbT [C]
Synonym: trd_1888
Alternate gene names: 221633862
Gene position: 1898562-1897894 (Counterclockwise)
Preceding gene: 221633866
Following gene: 221633860
Centisome position: 94.79
GC content: 68.01
Gene sequence:
>669_bases ATGAGCCGAGACGACCGTGGTGTTCTTTTCGATCTGGACGGTGTCCTCATCGACAGCGAGCAGGCGCATTTCGAGGCCAC GCGCCAGGCGTTCCGTCACCTGCGCCTTCCCGAACTCACCGAAGACCTCTACCGAAGCCAGATGATCGGCCGACCTGACC GGGAAGCGATCGCGGCGGCGATGCACGCGCTCGGCATCCCCGCCAGCTGGCTCGAACCGGTTCTGGAAAGCAAAGCAGAC TTCTATCAGGAACTCTTGGCCGCAGGTCGCGTCGACCTCTTGACCGATGGGATCGCCGCAGTACACGCCGCGCTCGAGGC TGGTTATCCGGTCGCTCTCGTCACCGGAGCGCTGGCTGTCGAGGCGCACTGGGCACTCCGCGCCGCTGGCCTGATGGGCC GGATCACGACGGTCGTCACGGCAGAGGACGTCCGCGCCGGGAAACCGGACCCAGAGCCGTATCGCACCGCCTGCAGCCGG CTCGGGGTCGCGCCCGGACGGAGCGTCGCTGTCGAGGACTCGCCAGCTGGAGTCGCGGCGGGACGCGCAGCAGGGTTGCG CGTCCTGGCCGTCGCCCGCCAGCCCTTCCCCGAACTCGCCGCAGCCGATCGGGTCGTTACCGTCCTCTCCTGGGAAGCGA TCGCCGACCTGTTGGCTCGCTCACGCTAG
Upstream 100 bases:
>100_bases GCGGTCGTCATCGTCCATCTCCTCGCTTTCGAGCGCCGTCGCGTTGCGCTCGAAAACAAGTATGCTGGACTCGGCACGAG CGCGTGCAGGGAGTGGATGC
Downstream 100 bases:
>100_bases CTTGCCAACTCTGCCAGTTTGCGAGCCAGCGCGATGTCGCGCTCGGTAATTCCCCCTGCTTCGTGGGTGGTGAGCAGCAA ATGCACGCGGTTGTACCGAA
Product: hydrolase
Products: beta-D-glucose 6-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAAMHALGIPASWLEPVLESKAD FYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAVEAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSR LGVAPGRSVAVEDSPAGVAAGRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR
Sequences:
>Translated_222_residues MSRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAAMHALGIPASWLEPVLESKAD FYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAVEAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSR LGVAPGRSVAVEDSPAGVAAGRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR >Mature_221_residues SRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAAMHALGIPASWLEPVLESKADF YQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAVEAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSRL GVAPGRSVAVEDSPAGVAAGRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=214, Percent_Identity=34.5794392523364, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787576, Length=190, Percent_Identity=26.3157894736842, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1789046, Length=197, Percent_Identity=28.4263959390863, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 5.4.2.6
Molecular weight: Translated: 23680; Mature: 23549
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAA CCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH MHALGIPASWLEPVLESKADFYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSRLGVAPGRSVAVEDSPAGVAA HHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHH GRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRDDRGVLFDLDGVLIDSEQAHFEATRQAFRHLRLPELTEDLYRSQMIGRPDREAIAAA CCCCCCEEEECCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH MHALGIPASWLEPVLESKADFYQELLAAGRVDLLTDGIAAVHAALEAGYPVALVTGALAV HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EAHWALRAAGLMGRITTVVTAEDVRAGKPDPEPYRTACSRLGVAPGRSVAVEDSPAGVAA HHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHH GRAAGLRVLAVARQPFPELAAADRVVTVLSWEAIADLLARSR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-D-glucose 1-phosphate
Specific reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]