Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633849

Identifier: 221633849

GI number: 221633849

Start: 1884827

End: 1885456

Strand: Reverse

Name: 221633849

Synonym: trd_1876

Alternate gene names: NA

Gene position: 1885456-1884827 (Counterclockwise)

Preceding gene: 221633850

Following gene: 221633848

Centisome position: 94.13

GC content: 66.35

Gene sequence:

>630_bases
GTGATGGCCGAGGAACGACGAACTGCGCAACCGGATGAGACGGAAGCCGCCCTCGCGCTGATCCGCGCGGTGCGTCGACG
GGTCCGAGCGATCAGCGATGGGGAATCCTGTGACTTCTGTGGTGAGACCCTCGGCCCGGAGCATGGCCACGTGCTCGGAC
TCCTCGACCGGCGGTTGCGGTGCGCCTGCCGTGCCTGCTACCTCCTGTTCCTGCCACGAGGCGCTGGGCGCGGGCGATTC
TGTGCTGTCCCGCAGCGCTATCGAGCGGTGCGCGATTCCACACTGGTCCAGGAGTGGACGGGGGTCATCTGTGGCCCAGT
TCAGCTCGCCTTCGCCTTTCTCCACTCCGGAACCGGACGGATCACGGTCTGCTATCCCAGCCCTCAGGGGCTGGCCGAGT
CGTTCCTACCTGACGGCGTACCCATTGTCTCAGCGCTCCGCTCGCTCCTGCAACCTGACGTCGAGGCCCTCCTCTGCTGG
CGCCGCGCCGTCGGCGCAGTCACCTTTCTCGTCCCGATCGACGTCTGCTATGAGCTTGTCGCCCGGCTCCGCCTGCCCTC
GAACCGGACCGACCTCGACGCGCTGTTGGAGGAGTTTTTCGACCGTCTCCACTCTCGGTGTGAGGAGTAA

Upstream 100 bases:

>100_bases
AGAACAGCTCTCCAGCTTGGGAACCGGGAGAGCTGCTCTGCCCACCGGTCGTTGCCTCTCGGGTTGCCTCCCGCAGGGAC
ACCCGATGAGAGGAAGCGGG

Downstream 100 bases:

>100_bases
GCCGCATGGCCAGATTCCGCTTCCACTGCCTCGATGTCCGACCGGAACCGTACGCCGCCGTGCCGACGCTCGTCTTCCGC
TTAGCGATCGCGGAAGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MMAEERRTAQPDETEAALALIRAVRRRVRAISDGESCDFCGETLGPEHGHVLGLLDRRLRCACRACYLLFLPRGAGRGRF
CAVPQRYRAVRDSTLVQEWTGVICGPVQLAFAFLHSGTGRITVCYPSPQGLAESFLPDGVPIVSALRSLLQPDVEALLCW
RRAVGAVTFLVPIDVCYELVARLRLPSNRTDLDALLEEFFDRLHSRCEE

Sequences:

>Translated_209_residues
MMAEERRTAQPDETEAALALIRAVRRRVRAISDGESCDFCGETLGPEHGHVLGLLDRRLRCACRACYLLFLPRGAGRGRF
CAVPQRYRAVRDSTLVQEWTGVICGPVQLAFAFLHSGTGRITVCYPSPQGLAESFLPDGVPIVSALRSLLQPDVEALLCW
RRAVGAVTFLVPIDVCYELVARLRLPSNRTDLDALLEEFFDRLHSRCEE
>Mature_209_residues
MMAEERRTAQPDETEAALALIRAVRRRVRAISDGESCDFCGETLGPEHGHVLGLLDRRLRCACRACYLLFLPRGAGRGRF
CAVPQRYRAVRDSTLVQEWTGVICGPVQLAFAFLHSGTGRITVCYPSPQGLAESFLPDGVPIVSALRSLLQPDVEALLCW
RRAVGAVTFLVPIDVCYELVARLRLPSNRTDLDALLEEFFDRLHSRCEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23287; Mature: 23287

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAEERRTAQPDETEAALALIRAVRRRVRAISDGESCDFCGETLGPEHGHVLGLLDRRLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
CACRACYLLFLPRGAGRGRFCAVPQRYRAVRDSTLVQEWTGVICGPVQLAFAFLHSGTGR
HHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
ITVCYPSPQGLAESFLPDGVPIVSALRSLLQPDVEALLCWRRAVGAVTFLVPIDVCYELV
EEEEECCCHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLRLPSNRTDLDALLEEFFDRLHSRCEE
HHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMAEERRTAQPDETEAALALIRAVRRRVRAISDGESCDFCGETLGPEHGHVLGLLDRRLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
CACRACYLLFLPRGAGRGRFCAVPQRYRAVRDSTLVQEWTGVICGPVQLAFAFLHSGTGR
HHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
ITVCYPSPQGLAESFLPDGVPIVSALRSLLQPDVEALLCWRRAVGAVTFLVPIDVCYELV
EEEEECCCHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLRLPSNRTDLDALLEEFFDRLHSRCEE
HHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA