Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633847

Identifier: 221633847

GI number: 221633847

Start: 1882882

End: 1884183

Strand: Reverse

Name: 221633847

Synonym: trd_1874

Alternate gene names: NA

Gene position: 1884183-1882882 (Counterclockwise)

Preceding gene: 221633848

Following gene: 221633846

Centisome position: 94.07

GC content: 64.44

Gene sequence:

>1302_bases
ATGAGCGTGATCGACTTTTCGCGGGCCATGGCGATTGCCGACGCGGTTCTGTACGAGGGCTACGCGCTCTATCCGTACCG
CGCCTCGGCTCGCAAGAATCGCTACCGCTGGCAGTTCGGGGTGGTGTTTCCCCCCGGCTATGCGCGGCAGGCCATTGGCG
AGCAGTGGGCATTGCACGCCGAGTCCATCGTCGAAGGCGATCCGACCGCACACTTGTGTATCATGGCACGTTTCTTGCAG
CTGGAAAGCCGCCAGGTCGAGGCGCGCACGCGCGATGGGTCTTTCCTGCCGGTTCCGGCACTTCAGGTCGGGGATGTCTT
GCACGTCACCTGGGACGAAGGCGTCGAGCGTCTCGTATGTTGGGAGGGACAGCTGCAGGATCTTCTGTCGGCCGAGTGCC
GTGTCCCCTTTCAGCTCGATGGGACAAGGGACACGATGATGCTGACCGATGAGAGCGGCACGGTGACGGGCCGTGTCCTC
CGTCGCCGTGAGCCGCTCTCCGGTGTCCTCGCTCTCCAGGCAACCGCGCTGCATCCAGGAGCGAGTGTCATCCAGATCCG
GATCGAGAACCAGACGCCGTGGCCGCACGATGCCGAGCCGGTCCGCGCTGAGGCGGTCCGCTTTGCATTCGTCGGGACAC
ACCTGTTGCTCGGTGTCACCGATGGCTCCTTCATCTCGATGATCGATCCGCCGCCACCGCTCAAAGCGACGGCAGAGCGT
TGTCGCAGCCAAGGGCTCTGGCCGGTCCTGGTGGGCGAGCCCGGTGAGCGGAGGATGCTCCTCGCTGCCCCGATCATCCT
CGAGGACTACCCTCGGATCGCCCCGGAGAGCCCGCGTCTCCTCTACGATGGGACGGAGATCGACGAGCTGCTCATCCAAC
GGACTCTCCTACTGACCGAGGAAGAGAAGCGCGAGGCACGAGCCACCGACCCCCGGATCGCGGAGCTGCTCGACCACCTC
GAGGCGCTGGCTCCCGCTGCGCTGCAGCAACTGCACGGGGCCATCCGGTCCCTGCGCTCGCTGGACACGACCACTGCACA
ACACCCGAAGGGCATGCTGCGGGGTCAACGAGTTCGGCTGCGTCCCAAACTCGGCCGAGGTGATATCCAGGACTTTTTTC
TCGATGGCAAGGAGGCGATCATCGAGGAGGTGCGCACCGACATCACCGGCACGACCTATTTCGGAGTTACGCTCGCCGAT
GACCCTGATGCGGACCTTCTCCGCGCGTGGGGACGGTTTCGCTATTTCACCCTGGATGAGCTCGAGTTTCTGTCGGGAGA
GCGGGAATGCCACGGGCCTTGA

Upstream 100 bases:

>100_bases
AGACGATCGCAGCGCTCCAACGCTTCAAGGCGAGCCGGGGACTTCCTACCTGGGAAAGCGTGATGGCAGCACTCCTGGCC
GCAGCCGAACGGGGTGAGAC

Downstream 100 bases:

>100_bases
TTGCCGGGATCGGGAATATCTTTTTGCGCGATGACGGGTTCGGCTCGGCGGTGCTGCAACGTTTGCAGCGCGAGTCGCTT
CCTCCCTGGGTGACGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSVIDFSRAMAIADAVLYEGYALYPYRASARKNRYRWQFGVVFPPGYARQAIGEQWALHAESIVEGDPTAHLCIMARFLQ
LESRQVEARTRDGSFLPVPALQVGDVLHVTWDEGVERLVCWEGQLQDLLSAECRVPFQLDGTRDTMMLTDESGTVTGRVL
RRREPLSGVLALQATALHPGASVIQIRIENQTPWPHDAEPVRAEAVRFAFVGTHLLLGVTDGSFISMIDPPPPLKATAER
CRSQGLWPVLVGEPGERRMLLAAPIILEDYPRIAPESPRLLYDGTEIDELLIQRTLLLTEEEKREARATDPRIAELLDHL
EALAPAALQQLHGAIRSLRSLDTTTAQHPKGMLRGQRVRLRPKLGRGDIQDFFLDGKEAIIEEVRTDITGTTYFGVTLAD
DPDADLLRAWGRFRYFTLDELEFLSGERECHGP

Sequences:

>Translated_433_residues
MSVIDFSRAMAIADAVLYEGYALYPYRASARKNRYRWQFGVVFPPGYARQAIGEQWALHAESIVEGDPTAHLCIMARFLQ
LESRQVEARTRDGSFLPVPALQVGDVLHVTWDEGVERLVCWEGQLQDLLSAECRVPFQLDGTRDTMMLTDESGTVTGRVL
RRREPLSGVLALQATALHPGASVIQIRIENQTPWPHDAEPVRAEAVRFAFVGTHLLLGVTDGSFISMIDPPPPLKATAER
CRSQGLWPVLVGEPGERRMLLAAPIILEDYPRIAPESPRLLYDGTEIDELLIQRTLLLTEEEKREARATDPRIAELLDHL
EALAPAALQQLHGAIRSLRSLDTTTAQHPKGMLRGQRVRLRPKLGRGDIQDFFLDGKEAIIEEVRTDITGTTYFGVTLAD
DPDADLLRAWGRFRYFTLDELEFLSGERECHGP
>Mature_432_residues
SVIDFSRAMAIADAVLYEGYALYPYRASARKNRYRWQFGVVFPPGYARQAIGEQWALHAESIVEGDPTAHLCIMARFLQL
ESRQVEARTRDGSFLPVPALQVGDVLHVTWDEGVERLVCWEGQLQDLLSAECRVPFQLDGTRDTMMLTDESGTVTGRVLR
RREPLSGVLALQATALHPGASVIQIRIENQTPWPHDAEPVRAEAVRFAFVGTHLLLGVTDGSFISMIDPPPPLKATAERC
RSQGLWPVLVGEPGERRMLLAAPIILEDYPRIAPESPRLLYDGTEIDELLIQRTLLLTEEEKREARATDPRIAELLDHLE
ALAPAALQQLHGAIRSLRSLDTTTAQHPKGMLRGQRVRLRPKLGRGDIQDFFLDGKEAIIEEVRTDITGTTYFGVTLADD
PDADLLRAWGRFRYFTLDELEFLSGERECHGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48535; Mature: 48404

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIDFSRAMAIADAVLYEGYALYPYRASARKNRYRWQFGVVFPPGYARQAIGEQWALHA
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
ESIVEGDPTAHLCIMARFLQLESRQVEARTRDGSFLPVPALQVGDVLHVTWDEGVERLVC
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEHHHCCCEEEE
WEGQLQDLLSAECRVPFQLDGTRDTMMLTDESGTVTGRVLRRREPLSGVLALQATALHPG
CCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCC
ASVIQIRIENQTPWPHDAEPVRAEAVRFAFVGTHLLLGVTDGSFISMIDPPPPLKATAER
CEEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEEEECCCCEEEECCCCCCHHHHHHH
CRSQGLWPVLVGEPGERRMLLAAPIILEDYPRIAPESPRLLYDGTEIDELLIQRTLLLTE
HHHCCCCEEEECCCCCCEEEEECCHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
EEKREARATDPRIAELLDHLEALAPAALQQLHGAIRSLRSLDTTTAQHPKGMLRGQRVRL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCEEEE
RPKLGRGDIQDFFLDGKEAIIEEVRTDITGTTYFGVTLADDPDADLLRAWGRFRYFTLDE
CCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCEEEEEHHH
LEFLSGERECHGP
HHHHCCCCCCCCC
>Mature Secondary Structure 
SVIDFSRAMAIADAVLYEGYALYPYRASARKNRYRWQFGVVFPPGYARQAIGEQWALHA
CCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHH
ESIVEGDPTAHLCIMARFLQLESRQVEARTRDGSFLPVPALQVGDVLHVTWDEGVERLVC
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCEEEEEHHHCCCEEEE
WEGQLQDLLSAECRVPFQLDGTRDTMMLTDESGTVTGRVLRRREPLSGVLALQATALHPG
CCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCC
ASVIQIRIENQTPWPHDAEPVRAEAVRFAFVGTHLLLGVTDGSFISMIDPPPPLKATAER
CEEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEEEECCCCEEEECCCCCCHHHHHHH
CRSQGLWPVLVGEPGERRMLLAAPIILEDYPRIAPESPRLLYDGTEIDELLIQRTLLLTE
HHHCCCCEEEECCCCCCEEEEECCHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
EEKREARATDPRIAELLDHLEALAPAALQQLHGAIRSLRSLDTTTAQHPKGMLRGQRVRL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCEEEE
RPKLGRGDIQDFFLDGKEAIIEEVRTDITGTTYFGVTLADDPDADLLRAWGRFRYFTLDE
CCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCEEEEEHHH
LEFLSGERECHGP
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA