| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is speG [C]
Identifier: 221633809
GI number: 221633809
Start: 1844895
End: 1845494
Strand: Reverse
Name: speG [C]
Synonym: trd_1836
Alternate gene names: 221633809
Gene position: 1845494-1844895 (Counterclockwise)
Preceding gene: 221633811
Following gene: 221633808
Centisome position: 92.14
GC content: 62.83
Gene sequence:
>600_bases ATGGAAGAGTATCAGCATCTGCAGGTTATCGTCCCTGGCAAACTCGTCTACCTCGGTCCGATCCGGCGCGACTTGGCCGC AGTCTATCAGCGGTGGATGAACGATCTCGAGGTCTCGCGCACGCTGACTGCTCATTGGCGGGTTCCCTTCACCGTCGAGG ACGAAGTCGAGTGGTTCGAGCAAGCCCGGCGCGACCCAACACGCCGGGTCTTCACGATCTACGAGCGCCCCGATGACCGC CCGGTCGGCAACGCAGAACTCTTCGGGATCGACTTCGCTGTCGGGAGCGCCGAGGTCGGGATCGTCATCGGTGAGCGGAG CGTTTGGGGACGGGGATACGCGACCGAGGCGCTGACTCTCCTCTTGGACTTCGGCTTCACGGTCCTCGGCTTGCATCACA TCTGGCTACGCTATTACGCAGCGAACGAGCGGGCACGAGCCGTCTACGACCGTGTCGGATTCCGGGAAGTCGGTCGCCTG CGCCAAGCGACGAAGATCGGTCCGTACCGCGACGACATCGTGATCATGGATATCCTGGCGAGCGAGTTCCAGAGCCCAGT TCTGGCCGCCAAATTGCGCCTGCCGGGGTCGACGCCATGA
Upstream 100 bases:
>100_bases GAGCCACACGGAGACCTCCTGCACGGCACTCGCCGCCGCCAGCGTAACACGGTCGTGGGGAAGCGTCACACAGGTGAGCG GGGAGGAGCAGGACATAGCG
Downstream 100 bases:
>100_bases TGGAATCGCGTCGCGCGTATACTGGAAGGTGAACCAGCCAGCTTGGCAGGGAACTGCCGCGAGCGTGTGCTGGAACGATC TCCTGGTGTTGCCAGGAGAA
Product: n-acetyltransferase, gnat family
Products: Coenzyme A; H+; N8-Acetylspermidine [C]
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; Gcn5-Related N-Acetyltransferase; Spermidine N1-Acetyltransferase; N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Ribosomal Protein N-Acetylase; N-Acetyltransferase Gnat Family; Aminoglycoside N6-Acetyltransferase; Gcn5-Like N-Acetyltransferase; GNAT Family N-Acetyltransferase; Kanamycin Resistance Protein-Related Protein; GNAT Family Acetyltransferase; Pseudaminic Acid Biosynthesis N-Acetyl Transferase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MEEYQHLQVIVPGKLVYLGPIRRDLAAVYQRWMNDLEVSRTLTAHWRVPFTVEDEVEWFEQARRDPTRRVFTIYERPDDR PVGNAELFGIDFAVGSAEVGIVIGERSVWGRGYATEALTLLLDFGFTVLGLHHIWLRYYAANERARAVYDRVGFREVGRL RQATKIGPYRDDIVIMDILASEFQSPVLAAKLRLPGSTP
Sequences:
>Translated_199_residues MEEYQHLQVIVPGKLVYLGPIRRDLAAVYQRWMNDLEVSRTLTAHWRVPFTVEDEVEWFEQARRDPTRRVFTIYERPDDR PVGNAELFGIDFAVGSAEVGIVIGERSVWGRGYATEALTLLLDFGFTVLGLHHIWLRYYAANERARAVYDRVGFREVGRL RQATKIGPYRDDIVIMDILASEFQSPVLAAKLRLPGSTP >Mature_199_residues MEEYQHLQVIVPGKLVYLGPIRRDLAAVYQRWMNDLEVSRTLTAHWRVPFTVEDEVEWFEQARRDPTRRVFTIYERPDDR PVGNAELFGIDFAVGSAEVGIVIGERSVWGRGYATEALTLLLDFGFTVLGLHHIWLRYYAANERARAVYDRVGFREVGRL RQATKIGPYRDDIVIMDILASEFQSPVLAAKLRLPGSTP
Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.57 [C]
Molecular weight: Translated: 22880; Mature: 22880
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEYQHLQVIVPGKLVYLGPIRRDLAAVYQRWMNDLEVSRTLTAHWRVPFTVEDEVEWFE CCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEEEEECEEECHHHHHHH QARRDPTRRVFTIYERPDDRPVGNAELFGIDFAVGSAEVGIVIGERSVWGRGYATEALTL HHHCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHH LLDFGFTVLGLHHIWLRYYAANERARAVYDRVGFREVGRLRQATKIGPYRDDIVIMDILA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEHHHHHH SEFQSPVLAAKLRLPGSTP HHHCCCCEEEEEECCCCCC >Mature Secondary Structure MEEYQHLQVIVPGKLVYLGPIRRDLAAVYQRWMNDLEVSRTLTAHWRVPFTVEDEVEWFE CCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEEEEECEEECHHHHHHH QARRDPTRRVFTIYERPDDRPVGNAELFGIDFAVGSAEVGIVIGERSVWGRGYATEALTL HHHCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHH LLDFGFTVLGLHHIWLRYYAANERARAVYDRVGFREVGRLRQATKIGPYRDDIVIMDILA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEHHHHHH SEFQSPVLAAKLRLPGSTP HHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; Spermidine [C]
Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA