Click here to switch to the map view.

The map label for this gene is 221633795

Identifier: 221633795

GI number: 221633795

Start: 1830537

End: 1832645

Strand: Reverse

Name: 221633795

Synonym: trd_1822

Alternate gene names: NA

Gene position: 1832645-1830537 (Counterclockwise)

Preceding gene: 221633798

Following gene: 221633792

Centisome position: 91.49

GC content: 64.82

Gene sequence:

>2109_bases
ATGCGGGGGAGCCGACTGACGCGGCGGATGCTCCTGCGCGTGGCTGGCGGGGTCATCGCAGCGACGGTCATGGAGTTGGG
GAGCAGCCAGGCGCGTGGCGGGGTGATCCGGAGGACCAGTTGGTTCGTCGAGGGTCCGTTTCCCACAGCTGGCCAGATCC
TGACGCCGGTCTATCCATTGCCGTTTTCCTTCCGCAGCGTCGAGGTGAGCTGGCAGGCCTCGGTTCCCCGAGGTGCGCTG
TTGCAGCTCTCGGTCCGCCTGCGCAGCGACGGCGAAAGCTGGAGCGACTGGATCCCGCTCGCCGCTGATCCGCACACGCC
ACCAGCCCAGGACGATGGCTGGACCTATGCCCCACCGATCCTGGCCAGCGGACGAGCCGTCCAGCTCGGGATCGTCTGCG
AGCCGGGCATCGGAGGAGCGGGGCCACGAGTCGAAGCGATCCGCGTGACCGCGGTCGAAGTCTCTTTGAGCGACATGCAG
TGGTTCGCGAGCAGCGACCTCATCGATGGCTGGATCGTTCCTCGAGCCGGCTGGGGAGCTGATGAATCGTTGCGTTTCGA
TGAAAACGGGAAGGAAATCTGGCCACCACGCTACGCGCCGATCCAGAAAGTCATTGTCCACCATACCGTGACGCGCAACG
ATCCACCTGATCCGGCCGCGACGATCCGGGCCATTTACGCCTATCACGCTGTCACGCTCGGGTGGGGCGATATCGGCTAC
AACTTCGTCGTCGACTGGCAAGGACGCGTCTACGAAGGACGATACGGTGGTCCCAACGTCGTCGGCGCCCACACCGCCGG
GTACAACACGGGGACGCTCGGGATCGCTGTGCTGGGGGACTTCACGGCGACCGATCCCCCGCGGGTCGTCCTCGACGCGC
TGGCGCGTCTCGTCCGGACACGTGCAGGCCAACTCGACCCAGGCGGCATCGGGCCATTCCGCGACCTCGTGGACGTTCCC
AACATCGGTGGGCACCGCGACTACAACATCACCGAATGCCCGGGTGACCGGCTTTATGCACAGTTGCCGCTCCTCCGCGG
CATGCTCAAAGGAACTGGCCCGATCGTCTTCCCCTCCAAGCCGCGGCGCTTGGAACCGAGGGCCCAACTGGTCAGCGTGA
CCTTCACGCCAGCGAGCGAGTTGTACGCCGGCACACTCGTCCGGGTCGACGCGGTCGTTCGCAATGTCGGGCCGATCGAG
CTGCCCACCCAAGGACCGCCTCCAGGATTCATCTACGATGAAGGCCAAACATTCGACAGTGTCGGCTTTCCGAAGGAGGA
AGGAGCCTTTCGCGTCGGGGTCGATTTCGAAGGCAACACCGGCGTGCCCAACCCGTTCCGGTGGGGACTCCCTGCGCCGC
TCCCACCCGGACAGGAAGCGACCGTGACCGGTTTCATCCGCTTACGGTCCGTGCGCAGCTGGCGCCTGACGGCCAGCTTG
GTGCGCGAGTACGTGCGCTACGAGCAACAAGGCGTCTTCCCGAAAGACCTTACCACCCTGCCGCCACCGACTGCTCCGGT
TCCACCGAGCAGCGATCCGAACATGATCTATTTCGAGGTCACCCAGCACAATGTCCCGCGCGTTTTCTACGACTACTGGC
GAGCGAACGGGGGACTCGAGCGCTTCGGCTATCCACTGACCGAGCCATTCGTGGAGGTCTCCGCAACAGATGGGCAACAG
TATCTCGTGCAGTACTTCGAGCGAGCGCGCTTCGAGCACCACCCCGAGTTGGCCGGGACACCGTTCGAGGTTTTGCTGGG
GCTGCTCGGTGTCGAGCGGACACGCGGGCGCGAGAACGAGCCAGCGTTTCGGCCGGTGGAGCGGCCAGCCGATCCGCAGA
TCGATTACTTCGTCGAGACACGCCACACGTTACGGCCACCCTTCCAGGCATACTGGTGGAGCCGCGGGGGCCCTGCCGTC
TTCGGTTACCCGATCAGCGAACCGTTCGAAGAAGTGAGCAAAACGGACGGGCAACGCTACCTCGTCCAGTACTTCGAGCG
GAATCGCATGGAGTACCATCCCGAGCTGGCCGGAACTCGCTTCGAGATCCTGCTCGGCCATCTCGGCCGCGAGGCACTGA
TCGACCGCGGTTGGCTTCCCGGCGCGTGA

Upstream 100 bases:

>100_bases
AGGACCGATGGGACTGTTCGGACAGGTTGATCGTACACTCGCTGTGGCGTACGATTGCCCCCGTGCCGGCCGGTGAGGCA
GGCCACCCGAGGGGGACGCG

Downstream 100 bases:

>100_bases
GCTCGGTCAAATCCCCAGGCCAGCGAGCTGTTGCCGGAAGAGGGAGCGCGTCACATCGCTCAGGACGGGAAACGCGACCT
GGCTCGCCGTCACGACCCGA

Product: N-acetylmuramoyl-L-alanine amidase domain-containing protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; ErfK/YbiS/YcfS/YnhG Family Protein; LGFP Repeat-Containing Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Peptidase; Sortase Family Protein; VanW Family Protein; SCP-Like Extracellular; FG-GAP Repeat-Containing Protein; Negative Regulator Of Beta-Lactamase Expression; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; LysM Domain-Containing Protein; Beta-Lactamase; Glycoside Hydrolase Family; Twin-Arginine Translocation Pathway Signal; ErfK/YbiS/YcfS/YnhG Family; Polysaccharide Deacetylase; Spore Peptidoglycan Hydrolase; Excalibur Domain Protein; Ig Domain Domain Protein; LOW QUALITY PROTEIN Secreted Protein; Allergen V5/Tpx-1 Family Protein; Peptidase S8 And; 5-Nucleotidase Domain-Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase Lytc; NLP/P60 Protein; N-Acetymuramoyl-L-Alanine Amidase; N-Acetylmuramyl-L-Alanine Amidase; LGFP Repeat Protein

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MRGSRLTRRMLLRVAGGVIAATVMELGSSQARGGVIRRTSWFVEGPFPTAGQILTPVYPLPFSFRSVEVSWQASVPRGAL
LQLSVRLRSDGESWSDWIPLAADPHTPPAQDDGWTYAPPILASGRAVQLGIVCEPGIGGAGPRVEAIRVTAVEVSLSDMQ
WFASSDLIDGWIVPRAGWGADESLRFDENGKEIWPPRYAPIQKVIVHHTVTRNDPPDPAATIRAIYAYHAVTLGWGDIGY
NFVVDWQGRVYEGRYGGPNVVGAHTAGYNTGTLGIAVLGDFTATDPPRVVLDALARLVRTRAGQLDPGGIGPFRDLVDVP
NIGGHRDYNITECPGDRLYAQLPLLRGMLKGTGPIVFPSKPRRLEPRAQLVSVTFTPASELYAGTLVRVDAVVRNVGPIE
LPTQGPPPGFIYDEGQTFDSVGFPKEEGAFRVGVDFEGNTGVPNPFRWGLPAPLPPGQEATVTGFIRLRSVRSWRLTASL
VREYVRYEQQGVFPKDLTTLPPPTAPVPPSSDPNMIYFEVTQHNVPRVFYDYWRANGGLERFGYPLTEPFVEVSATDGQQ
YLVQYFERARFEHHPELAGTPFEVLLGLLGVERTRGRENEPAFRPVERPADPQIDYFVETRHTLRPPFQAYWWSRGGPAV
FGYPISEPFEEVSKTDGQRYLVQYFERNRMEYHPELAGTRFEILLGHLGREALIDRGWLPGA

Sequences:

>Translated_702_residues
MRGSRLTRRMLLRVAGGVIAATVMELGSSQARGGVIRRTSWFVEGPFPTAGQILTPVYPLPFSFRSVEVSWQASVPRGAL
LQLSVRLRSDGESWSDWIPLAADPHTPPAQDDGWTYAPPILASGRAVQLGIVCEPGIGGAGPRVEAIRVTAVEVSLSDMQ
WFASSDLIDGWIVPRAGWGADESLRFDENGKEIWPPRYAPIQKVIVHHTVTRNDPPDPAATIRAIYAYHAVTLGWGDIGY
NFVVDWQGRVYEGRYGGPNVVGAHTAGYNTGTLGIAVLGDFTATDPPRVVLDALARLVRTRAGQLDPGGIGPFRDLVDVP
NIGGHRDYNITECPGDRLYAQLPLLRGMLKGTGPIVFPSKPRRLEPRAQLVSVTFTPASELYAGTLVRVDAVVRNVGPIE
LPTQGPPPGFIYDEGQTFDSVGFPKEEGAFRVGVDFEGNTGVPNPFRWGLPAPLPPGQEATVTGFIRLRSVRSWRLTASL
VREYVRYEQQGVFPKDLTTLPPPTAPVPPSSDPNMIYFEVTQHNVPRVFYDYWRANGGLERFGYPLTEPFVEVSATDGQQ
YLVQYFERARFEHHPELAGTPFEVLLGLLGVERTRGRENEPAFRPVERPADPQIDYFVETRHTLRPPFQAYWWSRGGPAV
FGYPISEPFEEVSKTDGQRYLVQYFERNRMEYHPELAGTRFEILLGHLGREALIDRGWLPGA
>Mature_702_residues
MRGSRLTRRMLLRVAGGVIAATVMELGSSQARGGVIRRTSWFVEGPFPTAGQILTPVYPLPFSFRSVEVSWQASVPRGAL
LQLSVRLRSDGESWSDWIPLAADPHTPPAQDDGWTYAPPILASGRAVQLGIVCEPGIGGAGPRVEAIRVTAVEVSLSDMQ
WFASSDLIDGWIVPRAGWGADESLRFDENGKEIWPPRYAPIQKVIVHHTVTRNDPPDPAATIRAIYAYHAVTLGWGDIGY
NFVVDWQGRVYEGRYGGPNVVGAHTAGYNTGTLGIAVLGDFTATDPPRVVLDALARLVRTRAGQLDPGGIGPFRDLVDVP
NIGGHRDYNITECPGDRLYAQLPLLRGMLKGTGPIVFPSKPRRLEPRAQLVSVTFTPASELYAGTLVRVDAVVRNVGPIE
LPTQGPPPGFIYDEGQTFDSVGFPKEEGAFRVGVDFEGNTGVPNPFRWGLPAPLPPGQEATVTGFIRLRSVRSWRLTASL
VREYVRYEQQGVFPKDLTTLPPPTAPVPPSSDPNMIYFEVTQHNVPRVFYDYWRANGGLERFGYPLTEPFVEVSATDGQQ
YLVQYFERARFEHHPELAGTPFEVLLGLLGVERTRGRENEPAFRPVERPADPQIDYFVETRHTLRPPFQAYWWSRGGPAV
FGYPISEPFEEVSKTDGQRYLVQYFERNRMEYHPELAGTRFEILLGHLGREALIDRGWLPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI156616294, Length=151, Percent_Identity=40.3973509933775, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4827036, Length=171, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI56550073, Length=170, Percent_Identity=33.5294117647059, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24645946, Length=206, Percent_Identity=32.5242718446602, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356551, Length=147, Percent_Identity=35.3741496598639, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24645949, Length=147, Percent_Identity=35.3741496598639, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281365923, Length=188, Percent_Identity=31.9148936170213, Blast_Score=90, Evalue=5e-18,
Organism=Drosophila melanogaster, GI281365921, Length=188, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI45551539, Length=188, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18860051, Length=177, Percent_Identity=34.4632768361582, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24651867, Length=149, Percent_Identity=35.5704697986577, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574426, Length=150, Percent_Identity=32, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356683, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651865, Length=142, Percent_Identity=33.8028169014084, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24586649, Length=142, Percent_Identity=33.8028169014084, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21356681, Length=176, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45553005, Length=153, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77787; Mature: 77787

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSRLTRRMLLRVAGGVIAATVMELGSSQARGGVIRRTSWFVEGPFPTAGQILTPVYPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCEECCCCCC
PFSFRSVEVSWQASVPRGALLQLSVRLRSDGESWSDWIPLAADPHTPPAQDDGWTYAPPI
CCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCEECCCH
LASGRAVQLGIVCEPGIGGAGPRVEAIRVTAVEVSLSDMQWFASSDLIDGWIVPRAGWGA
HCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEHHHHHHHHCCCCCCCEEECCCCCCC
DESLRFDENGKEIWPPRYAPIQKVIVHHTVTRNDPPDPAATIRAIYAYHAVTLGWGDIGY
CCCEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCC
NFVVDWQGRVYEGRYGGPNVVGAHTAGYNTGTLGIAVLGDFTATDPPRVVLDALARLVRT
EEEEECCCEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
RAGQLDPGGIGPFRDLVDVPNIGGHRDYNITECPGDRLYAQLPLLRGMLKGTGPIVFPSK
HCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCC
PRRLEPRAQLVSVTFTPASELYAGTLVRVDAVVRNVGPIELPTQGPPPGFIYDEGQTFDS
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCC
VGFPKEEGAFRVGVDFEGNTGVPNPFRWGLPAPLPPGQEATVTGFIRLRSVRSWRLTASL
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHH
VREYVRYEQQGVFPKDLTTLPPPTAPVPPSSDPNMIYFEVTQHNVPRVFYDYWRANGGLE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHH
RFGYPLTEPFVEVSATDGQQYLVQYFERARFEHHPELAGTPFEVLLGLLGVERTRGRENE
HCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCC
PAFRPVERPADPQIDYFVETRHTLRPPFQAYWWSRGGPAVFGYPISEPFEEVSKTDGQRY
CCCCCCCCCCCCCCEEEEECHHHCCCCHHHHEECCCCCEEEECCCCHHHHHHHHCCCHHH
LVQYFERNRMEYHPELAGTRFEILLGHLGREALIDRGWLPGA
HHHHHHHCCCEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCC
>Mature Secondary Structure
MRGSRLTRRMLLRVAGGVIAATVMELGSSQARGGVIRRTSWFVEGPFPTAGQILTPVYPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCEECCCCCC
PFSFRSVEVSWQASVPRGALLQLSVRLRSDGESWSDWIPLAADPHTPPAQDDGWTYAPPI
CCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCEECCCH
LASGRAVQLGIVCEPGIGGAGPRVEAIRVTAVEVSLSDMQWFASSDLIDGWIVPRAGWGA
HCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEHHHHHHHHCCCCCCCEEECCCCCCC
DESLRFDENGKEIWPPRYAPIQKVIVHHTVTRNDPPDPAATIRAIYAYHAVTLGWGDIGY
CCCEEECCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCC
NFVVDWQGRVYEGRYGGPNVVGAHTAGYNTGTLGIAVLGDFTATDPPRVVLDALARLVRT
EEEEECCCEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
RAGQLDPGGIGPFRDLVDVPNIGGHRDYNITECPGDRLYAQLPLLRGMLKGTGPIVFPSK
HCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCC
PRRLEPRAQLVSVTFTPASELYAGTLVRVDAVVRNVGPIELPTQGPPPGFIYDEGQTFDS
CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCC
VGFPKEEGAFRVGVDFEGNTGVPNPFRWGLPAPLPPGQEATVTGFIRLRSVRSWRLTASL
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHH
VREYVRYEQQGVFPKDLTTLPPPTAPVPPSSDPNMIYFEVTQHNVPRVFYDYWRANGGLE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHH
RFGYPLTEPFVEVSATDGQQYLVQYFERARFEHHPELAGTPFEVLLGLLGVERTRGRENE
HCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCCCC
PAFRPVERPADPQIDYFVETRHTLRPPFQAYWWSRGGPAVFGYPISEPFEEVSKTDGQRY
CCCCCCCCCCCCCCEEEEECHHHCCCCHHHHEECCCCCEEEECCCCHHHHHHHHCCCHHH
LVQYFERNRMEYHPELAGTRFEILLGHLGREALIDRGWLPGA
HHHHHHHCCCEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA