| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633784
Identifier: 221633784
GI number: 221633784
Start: 1816098
End: 1817093
Strand: Reverse
Name: 221633784
Synonym: trd_1811
Alternate gene names: NA
Gene position: 1817093-1816098 (Counterclockwise)
Preceding gene: 221633785
Following gene: 221633782
Centisome position: 90.72
GC content: 59.74
Gene sequence:
>996_bases ATGGAACCAGGACTTTTTCTGATCCTCGCCCAAACGTGTGGTCCGACGTGCGATCCCTGGTTCGATGCGTTGCTGGCACT CGCCACGACCGGATCACTGTTCCTGGTGACCGTTTTCGGTTTCTGGGTCAGCTTCGAACGCCTGCGAGGATTTCGGCGGA TCCGTCGTCTCTCTACCGAGCCGATCGGGACAGTCCTGACAGGCCCATTCGACCGGTTGGTCGAACTACGAGGGCAAGCG AAACGTGCAACGGCAGAACGCATGCTCCTGACCGACACGATGGCTGCTGCCGGTAAGAGGACAATCACGGTCACCTGGGC GAGAAGCGTCTTCTGGAAAGATCGGTTCCGATTCCTACGTCACGAGGAATCCTTCTTGAACCAAATCGTCCTCGACGACG GGACAGGACAGATACTCGTCGACGCATCGGACGCCCACCGGTACTGGTTGTCGAAAGCCGCCAACTGGAAGATCGAAGAG GCGCCGGATTGGGCGCGGCAACGCTATGAGGAACTGAGGCAAAGACACGGCGATACGATCGCAAGTTGGGAAGACTCCGG ATTTTCAGCCCGCTCGATCGAAGTCTGGGAAGAATATCTTCCGATCGGCAGCGAACTCTTCGTCGTCGGTCGCTTGCAAC CAGCACCGGGGAATGGGAACACCGCAAATGGATCACTCGGACTCGCCACGGTCCGCGCAGAAGTTGCGAGTCTGGGTCGC GAGTCCTCGACGGGCTACGGGTTGCTCCTCGAGGGAATCCTGGCGCTCCTCGCTGCCGCTGGTGCAGCTATAGGCCTCTC TCGCCTCTCGTCTTGGTTCGTCGACGCATGGGCACGTTATCTCGCTGACCAACGGTCCTTGTGGGACCGGGTGTTGGAAG GTGGCATCATGCTCGTCGTCTTGGCCGTGGCGTCATTGCTCTCGCTCGTCATGATCGTCGTGACGGGCGAGATCCTCGGC AAAGCGATCACCCTGCGTGGCCGCAAGAGCGAGTGA
Upstream 100 bases:
>100_bases TGCCCGGAATGCTGGGACCGCCAGCGCTGGCCGTGAGCACACGCGACAGGGGAGAGTACGGGAGTCGCGCGGATCTGGAT GCAGCGGGATGTGGAGTCGC
Downstream 100 bases:
>100_bases GCCGAGCACCTGAGCGAGAAGCGCTCGTTTCCCGTGCTTCGCCGGGAAGCGGCCTACTCAGGCGGGCAGCGGCACACCGT AGCGCGTCGCGATCTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTEPIGTVLTGPFDRLVELRGQA KRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLRHEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEE APDWARQRYEELRQRHGDTIASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVVLAVASLLSLVMIVVTGEILG KAITLRGRKSE
Sequences:
>Translated_331_residues MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTEPIGTVLTGPFDRLVELRGQA KRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLRHEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEE APDWARQRYEELRQRHGDTIASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVVLAVASLLSLVMIVVTGEILG KAITLRGRKSE >Mature_331_residues MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTEPIGTVLTGPFDRLVELRGQA KRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLRHEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEE APDWARQRYEELRQRHGDTIASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVVLAVASLLSLVMIVVTGEILG KAITLRGRKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36650; Mature: 36650
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTE CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIGTVLTGPFDRLVELRGQAKRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLR CCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH HEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEEAPDWARQRYEELRQRHGDTI HHHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEE ASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR ECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LAVASLLSLVMIVVTGEILGKAITLRGRKSE HHHHHHHHHHHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTE CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIGTVLTGPFDRLVELRGQAKRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLR CCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH HEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEEAPDWARQRYEELRQRHGDTI HHHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEE ASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR ECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LAVASLLSLVMIVVTGEILGKAITLRGRKSE HHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA