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The map label for this gene is 221633698

Identifier: 221633698

GI number: 221633698

Start: 1729634

End: 1730767

Strand: Reverse

Name: 221633698

Synonym: trd_1725

Alternate gene names: NA

Gene position: 1730767-1729634 (Counterclockwise)

Preceding gene: 221633699

Following gene: 221633697

Centisome position: 86.41

GC content: 66.84

Gene sequence:

>1134_bases
ATGGTCGTGGTCGGATCTTCACGAGAGACGACCGAAGCGGAGACGGCTGGTGGGGCGGGTGCTCGCACCCCAGCTGACCG
CCGGCGCGCGCGTGCGGAACGGGCTCGGGGGCCGCTCGGCCGTCTCTTCCGATATGCTGGTCTCTCGATTGGTGCGCTCC
TGGGCTGGTCGTTCGGCGGATTCTTCGCCGCTCGTCCGGAACTGGTTGCGGTGACACAGTTCTTTCTCGCCTCGGTCCTC
GCCGCGCTCGGCTTTCTCGTGACGCCATATCTTCTGTTCGATCTCTCGGACGCGATCTGGGCGCGCTTGCGTGCGTTGAC
GGTCGATGCGCTGATCGCTGGCGGGATCGGTGCCTTCGCCGGTGGAGTGTTCGGGCTGTTGTTGGCCTGGCCGTTGGCGC
TCCTGCCTCGCCCCGCGGGGCAACTGATCCCCCCGACTGTTGCTCTGCTGGCCATGCTGGTCGGGGCAGCGCTGGTGAGC
AGCCGGCGTCGCGAGTTGATGGAGGTCATGGGTCTCCGTTCTCAGCGGCCCGGGCTCGCCCTCGTCCTCGATACCAGCGC
GTTGATCGACGGGCGGATCGGAGAATTCGTCCGGCTTGCCGTACCCGATGCGCAGCTTCTCGTCCCGGAAGAAGTCTTGC
GGGAACTTCATCGGCTGGCTGAACACAGCGACCCTCCCCGACGAGCGCGTGGCCGGCGCGGCCTCGAGCTTTTGCGGCGC
TTGCGTGAGGAGGTCGGTTCCCAGTTCGTGGTGGTTCCCGCGCGCGTTCCCGAAACCGAAGCGGACGATGCAGTCGTCGC
CTGCTGCCGAGAGTGCGCTGGTCGGCTGGTGACCTGCGATCAGCGTCTGGCGGACGTGGCTCGTGTACAGGGGCTCGTGG
TGTGGAATCCGCATCAGCTGGCCGAGGCACTCCGCAGTCCGGTACACGTGGGGGATCGCTTCGTCCTTCACCTGAGTGGT
CCGGGACGCGAGCCGGAGCAGGCGATCGGCTATCTGGACGATGGGACACTGGTCGTCGTCGAGGAAGCACGATCGCGCAT
CGGCCAGGACGTGCCAGTCGAGGTAACGCGGATCCTGCGGACACCAGCTGGACGCTTGGTCTTCGCGCAGTTGGTCGCGC
AGAGCGAGCCCTGA

Upstream 100 bases:

>100_bases
AGTGGACATGCTGGCAGCACGGGCTCGCTCGGGTCGAGGAGGTGCTGCTACACTGCCTGAGCAGTGAGAGTCGGCGCCAG
CGAGCGATGGTGCGGTCGCG

Downstream 100 bases:

>100_bases
TGACGTGCAGTGCGGTCGTTCCGGCGGCGGGGCGAGGTCAACGACTCGGCGGGCGCGAGAAACCGCTGCTCCCGCTGGCT
GGTCGTCCTGCCTTGGCCTG

Product: nucleotide binding protein, PINc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MVVVGSSRETTEAETAGGAGARTPADRRRARAERARGPLGRLFRYAGLSIGALLGWSFGGFFAARPELVAVTQFFLASVL
AALGFLVTPYLLFDLSDAIWARLRALTVDALIAGGIGAFAGGVFGLLLAWPLALLPRPAGQLIPPTVALLAMLVGAALVS
SRRRELMEVMGLRSQRPGLALVLDTSALIDGRIGEFVRLAVPDAQLLVPEEVLRELHRLAEHSDPPRRARGRRGLELLRR
LREEVGSQFVVVPARVPETEADDAVVACCRECAGRLVTCDQRLADVARVQGLVVWNPHQLAEALRSPVHVGDRFVLHLSG
PGREPEQAIGYLDDGTLVVVEEARSRIGQDVPVEVTRILRTPAGRLVFAQLVAQSEP

Sequences:

>Translated_377_residues
MVVVGSSRETTEAETAGGAGARTPADRRRARAERARGPLGRLFRYAGLSIGALLGWSFGGFFAARPELVAVTQFFLASVL
AALGFLVTPYLLFDLSDAIWARLRALTVDALIAGGIGAFAGGVFGLLLAWPLALLPRPAGQLIPPTVALLAMLVGAALVS
SRRRELMEVMGLRSQRPGLALVLDTSALIDGRIGEFVRLAVPDAQLLVPEEVLRELHRLAEHSDPPRRARGRRGLELLRR
LREEVGSQFVVVPARVPETEADDAVVACCRECAGRLVTCDQRLADVARVQGLVVWNPHQLAEALRSPVHVGDRFVLHLSG
PGREPEQAIGYLDDGTLVVVEEARSRIGQDVPVEVTRILRTPAGRLVFAQLVAQSEP
>Mature_377_residues
MVVVGSSRETTEAETAGGAGARTPADRRRARAERARGPLGRLFRYAGLSIGALLGWSFGGFFAARPELVAVTQFFLASVL
AALGFLVTPYLLFDLSDAIWARLRALTVDALIAGGIGAFAGGVFGLLLAWPLALLPRPAGQLIPPTVALLAMLVGAALVS
SRRRELMEVMGLRSQRPGLALVLDTSALIDGRIGEFVRLAVPDAQLLVPEEVLRELHRLAEHSDPPRRARGRRGLELLRR
LREEVGSQFVVVPARVPETEADDAVVACCRECAGRLVTCDQRLADVARVQGLVVWNPHQLAEALRSPVHVGDRFVLHLSG
PGREPEQAIGYLDDGTLVVVEEARSRIGQDVPVEVTRILRTPAGRLVFAQLVAQSEP

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40600; Mature: 40600

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVGSSRETTEAETAGGAGARTPADRRRARAERARGPLGRLFRYAGLSIGALLGWSFGG
CEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCC
FFAARPELVAVTQFFLASVLAALGFLVTPYLLFDLSDAIWARLRALTVDALIAGGIGAFA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GGVFGLLLAWPLALLPRPAGQLIPPTVALLAMLVGAALVSSRRRELMEVMGLRSQRPGLA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LVLDTSALIDGRIGEFVRLAVPDAQLLVPEEVLRELHRLAEHSDPPRRARGRRGLELLRR
EEEECHHHHCCCHHHEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHH
LREEVGSQFVVVPARVPETEADDAVVACCRECAGRLVTCDQRLADVARVQGLVVWNPHQL
HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEEECHHHH
AEALRSPVHVGDRFVLHLSGPGREPEQAIGYLDDGTLVVVEEARSRIGQDVPVEVTRILR
HHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHH
TPAGRLVFAQLVAQSEP
CCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVVVGSSRETTEAETAGGAGARTPADRRRARAERARGPLGRLFRYAGLSIGALLGWSFGG
CEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCC
FFAARPELVAVTQFFLASVLAALGFLVTPYLLFDLSDAIWARLRALTVDALIAGGIGAFA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GGVFGLLLAWPLALLPRPAGQLIPPTVALLAMLVGAALVSSRRRELMEVMGLRSQRPGLA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LVLDTSALIDGRIGEFVRLAVPDAQLLVPEEVLRELHRLAEHSDPPRRARGRRGLELLRR
EEEECHHHHCCCHHHEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHH
LREEVGSQFVVVPARVPETEADDAVVACCRECAGRLVTCDQRLADVARVQGLVVWNPHQL
HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEHHHHHHHHHHHCCEEEECHHHH
AEALRSPVHVGDRFVLHLSGPGREPEQAIGYLDDGTLVVVEEARSRIGQDVPVEVTRILR
HHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCEEEEHHHHHHCCCCCCHHHHHHHH
TPAGRLVFAQLVAQSEP
CCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8885268; 11679669 [H]