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The map label for this gene is 221633662

Identifier: 221633662

GI number: 221633662

Start: 1690166

End: 1691041

Strand: Reverse

Name: 221633662

Synonym: trd_1688

Alternate gene names: NA

Gene position: 1691041-1690166 (Counterclockwise)

Preceding gene: 221633682

Following gene: 221633661

Centisome position: 84.43

GC content: 66.44

Gene sequence:

>876_bases
ATGGCGATGGGAATCGTTTTCGGTGCCGTGGCGCCGCACGGTTTTCCGATCATCCCCGAGCTTTCCGAGGATGCCGAAGG
GGGTTTGGCGACGCGGGCCGCGATGTTCGAACTCGGGCGGCGCTGTGCTGCGGCGCAGCCGGACGTCCTCGTCGTGGCGA
CGCCGCATGGTGTGCGCGTAGACGGCATGGTCTGCCTGGCCTTGACGGCGCGCGGAGCAGGGACACTCCGCTGGCGTGGG
CGACAGATCGAGATGAACGTACCGTTGGACCGAGCAGCGACGGAGGCGATTGCGGGAGCAGCGCGCGAACTGGGTGTTCC
GGTGGCGTTGGCTGGCTTTGCCGGGAATCGCTGGGATCAATCGGTCATCCCGCTCGATTGGGGGACGATGACGCCGCTCT
GGTTTCTCGGGCACGGACGGAATCTGGTCGGCCATGGCGATGTCCTGGCGCCGCCGCCCGATGAAGATATCGGCCCGCCG
GTCGTGATCGTGACACCTTCCCGTCGGCTGCCGCGCGAACGCTTGGTGACGTTCGGTGAAGCCGTGGCGCTCGCTGCCGA
GCGAGACGGCCGGCGCATCGCCTTCATCGCCAGCTGTGACTGGGCACATACCCACCGTGCCGATGGCCCTTACGGATTTC
ATCCCGATGCCGCTGAGGTCGATCGGTTGGTAGTGGAAGCGCTCGAAGCCAACGATCCGGGCCGACTGATCGAGCTACCG
GAGGAGAAGGCAACGAACGCGGCGATCGATGGCTTGTGGCAGACCCTGATGCTGGCCGGGGTGATGCGACGGGTGCCCCT
GCGCGGCGAGGTCCTCTGCTACGAGGCGCCGAGCTACTACAGTATGATCGTCGCCGCGTTCAGCCCGATCGCCTGA

Upstream 100 bases:

>100_bases
CGGAGTCTCGCTACCCTCGGTAAACGCTGCGTAAACGGACGAGGTGGGACGCGTTGCCCTGCCTTCGCTGTCATGGGATA
CTGCCCGGGGAAGGAGGAAT

Downstream 100 bases:

>100_bases
CCGTCGCCGTGTCAGCCGAATGAACCACCTCCTCGTTCGGATACGCTCGTCATGGTAGGGTGTGGTTTTTACACCCGGGC
AACGAAAGGAAGAGGAGGCT

Product: aromatic ring-opening dioxygenase superfamily protein LigB

Products: NA

Alternate protein names: Dioxygenase; Extradiol Ring-Cleavage Dioxygenase; Ammecr1-Like Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAMGIVFGAVAPHGFPIIPELSEDAEGGLATRAAMFELGRRCAAAQPDVLVVATPHGVRVDGMVCLALTARGAGTLRWRG
RQIEMNVPLDRAATEAIAGAARELGVPVALAGFAGNRWDQSVIPLDWGTMTPLWFLGHGRNLVGHGDVLAPPPDEDIGPP
VVIVTPSRRLPRERLVTFGEAVALAAERDGRRIAFIASCDWAHTHRADGPYGFHPDAAEVDRLVVEALEANDPGRLIELP
EEKATNAAIDGLWQTLMLAGVMRRVPLRGEVLCYEAPSYYSMIVAAFSPIA

Sequences:

>Translated_291_residues
MAMGIVFGAVAPHGFPIIPELSEDAEGGLATRAAMFELGRRCAAAQPDVLVVATPHGVRVDGMVCLALTARGAGTLRWRG
RQIEMNVPLDRAATEAIAGAARELGVPVALAGFAGNRWDQSVIPLDWGTMTPLWFLGHGRNLVGHGDVLAPPPDEDIGPP
VVIVTPSRRLPRERLVTFGEAVALAAERDGRRIAFIASCDWAHTHRADGPYGFHPDAAEVDRLVVEALEANDPGRLIELP
EEKATNAAIDGLWQTLMLAGVMRRVPLRGEVLCYEAPSYYSMIVAAFSPIA
>Mature_290_residues
AMGIVFGAVAPHGFPIIPELSEDAEGGLATRAAMFELGRRCAAAQPDVLVVATPHGVRVDGMVCLALTARGAGTLRWRGR
QIEMNVPLDRAATEAIAGAARELGVPVALAGFAGNRWDQSVIPLDWGTMTPLWFLGHGRNLVGHGDVLAPPPDEDIGPPV
VIVTPSRRLPRERLVTFGEAVALAAERDGRRIAFIASCDWAHTHRADGPYGFHPDAAEVDRLVVEALEANDPGRLIELPE
EKATNAAIDGLWQTLMLAGVMRRVPLRGEVLCYEAPSYYSMIVAAFSPIA

Specific function: Unknown

COG id: COG3885

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31132; Mature: 31001

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMGIVFGAVAPHGFPIIPELSEDAEGGLATRAAMFELGRRCAAAQPDVLVVATPHGVRV
CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE
DGMVCLALTARGAGTLRWRGRQIEMNVPLDRAATEAIAGAARELGVPVALAGFAGNRWDQ
CCEEEEEEECCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
SVIPLDWGTMTPLWFLGHGRNLVGHGDVLAPPPDEDIGPPVVIVTPSRRLPRERLVTFGE
EEEECCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH
AVALAAERDGRRIAFIASCDWAHTHRADGPYGFHPDAAEVDRLVVEALEANDPGRLIELP
HEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECC
EEKATNAAIDGLWQTLMLAGVMRRVPLRGEVLCYEAPSYYSMIVAAFSPIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AMGIVFGAVAPHGFPIIPELSEDAEGGLATRAAMFELGRRCAAAQPDVLVVATPHGVRV
CCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE
DGMVCLALTARGAGTLRWRGRQIEMNVPLDRAATEAIAGAARELGVPVALAGFAGNRWDQ
CCEEEEEEECCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
SVIPLDWGTMTPLWFLGHGRNLVGHGDVLAPPPDEDIGPPVVIVTPSRRLPRERLVTFGE
EEEECCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH
AVALAAERDGRRIAFIASCDWAHTHRADGPYGFHPDAAEVDRLVVEALEANDPGRLIELP
HEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECC
EEKATNAAIDGLWQTLMLAGVMRRVPLRGEVLCYEAPSYYSMIVAAFSPIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA