The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633619

Identifier: 221633619

GI number: 221633619

Start: 1639998

End: 1641380

Strand: Reverse

Name: 221633619

Synonym: trd_1643

Alternate gene names: NA

Gene position: 1641380-1639998 (Counterclockwise)

Preceding gene: 221633628

Following gene: 221633611

Centisome position: 81.95

GC content: 64.14

Gene sequence:

>1383_bases
ATGAGATTCTCGCGACCGTTCCGACCGGACGGGGACAGCCGGCTGGGTCGCCTGCGTCGTTGGGCGGGGACGCGGCGCGG
GACGACGGTGCTGATCACGCTGGCCCTCGTCTTGGCGCTGGCGCTCCCGACTGTCGCCCAGCAGTGGGTCGGTGCCGGGC
ACAAGATGCCCAAGCTGCCGCCGGAGTCGGCCATCGCGCCGGCCGCGCCCAAGAGCGGCGACTGCCAGTACTTCCCGGAG
ACGCAGCACAACCTGTGCGGCGAGTTCCGCGCGTACTGGAACCGCACCGGCGGGCTGATGATCCACGGCTACCCCTTGAC
CGAGGAGTATTACGCGCCGGAGCTGGGGGTGGTGACGCAGTGGTTCGAGCGCTCGCGGCTCGAGTTCCACCCGAACAACC
CGCCGCAGTTCCGCGTGCTCCAGGGCCACGTCTCGCGCGAGATCCTGGCCATGCTGCAGGCGGGCTGGACCGGTACGCCG
GGCGCGACCCCGACCCCGTATCCGACCTACACGCCGTATCCGACCTACACGCCGTATCCGACCTACACGCCGTACCCGAC
CTACACGCCGTTCCCGCCGCCGCCGACGCCGCCGCCGACGCCACCTAGCGGCTACGTGCTGACGATCACACCGGCGAGCG
ATACGCGCGTGCTTGGGCTCGATCCTGATGGCGTGGGCTCGCTCACCGCGAATCAGCGGCGCGTCACCGCGAAGCTGACT
CTCGGTGGATCCCCAGTGGTCGGCCAGAACATCATTTTCACGGTCTCGGTTACCGGTGGCACTATTGCTCCAACCGCCCC
CCAAACAGTCGCGACGAACGCGCTGGGTGAGGCTTCGGTTGTCTATACGTTCACCGATGACGCGACGGTGGGTGGGTACT
ACGTGGTCACTGCCTGTGCCGACGTCTCTGCGCCGTTCGGCGCCTGCTCGGGCGAGCCGATAGCGACCACTATCACGTAC
ATGGTCAATGCGACCTTCACGAGCACGCCGAGTCCGTTCAACGTGGCAGAGGCAAATGCCGGTGGTACGAACACGGGTGT
GGATGGTTTTGTTCGAGTGGAAACAGCGGGTCCTGACACTCCGCTCACTGCGGCCCTGAAAGTGGTTCTCGAAATTTCGG
ACACTTTCCCAGTCAGCGCAGGTAATGCGAATGGTTCCTTTGCTGCCTGCAATAGCACGGACGGGACCGACAAGGTCAGC
GCGACTGTGAACCATACGGTGCCATTTGACCAAAATGTTTGGGCTTGCCATTATGTCAACGATGGGAGTGATGACACATT
CACGGTCAGAGCACATTGGGACGTCAATGGCAACGGTATCGTCGACACGGGTGAGCCGCAGATTTCCGGCTCGCCGATCA
CGGTCACGATCGTTGACTCTTAA

Upstream 100 bases:

>100_bases
AGCGCGCACCCTATCCGCTATACAGGGGGTGGACACGGACGGCAACGCGAGCGCGTGGACGGTCGGCCGGGCGCGTTGCC
GCGAGCATGGGAGGTGACCG

Downstream 100 bases:

>100_bases
GAGTTCATGATAACACTTGGCTATGACGTGCCGTTTGGAACTTCGCAGGTGTTCCACTCGAGCCCCGCTCATCGCGAGCG
GGGCTCGATTAGGCCCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MRFSRPFRPDGDSRLGRLRRWAGTRRGTTVLITLALVLALALPTVAQQWVGAGHKMPKLPPESAIAPAAPKSGDCQYFPE
TQHNLCGEFRAYWNRTGGLMIHGYPLTEEYYAPELGVVTQWFERSRLEFHPNNPPQFRVLQGHVSREILAMLQAGWTGTP
GATPTPYPTYTPYPTYTPYPTYTPYPTYTPFPPPPTPPPTPPSGYVLTITPASDTRVLGLDPDGVGSLTANQRRVTAKLT
LGGSPVVGQNIIFTVSVTGGTIAPTAPQTVATNALGEASVVYTFTDDATVGGYYVVTACADVSAPFGACSGEPIATTITY
MVNATFTSTPSPFNVAEANAGGTNTGVDGFVRVETAGPDTPLTAALKVVLEISDTFPVSAGNANGSFAACNSTDGTDKVS
ATVNHTVPFDQNVWACHYVNDGSDDTFTVRAHWDVNGNGIVDTGEPQISGSPITVTIVDS

Sequences:

>Translated_460_residues
MRFSRPFRPDGDSRLGRLRRWAGTRRGTTVLITLALVLALALPTVAQQWVGAGHKMPKLPPESAIAPAAPKSGDCQYFPE
TQHNLCGEFRAYWNRTGGLMIHGYPLTEEYYAPELGVVTQWFERSRLEFHPNNPPQFRVLQGHVSREILAMLQAGWTGTP
GATPTPYPTYTPYPTYTPYPTYTPYPTYTPFPPPPTPPPTPPSGYVLTITPASDTRVLGLDPDGVGSLTANQRRVTAKLT
LGGSPVVGQNIIFTVSVTGGTIAPTAPQTVATNALGEASVVYTFTDDATVGGYYVVTACADVSAPFGACSGEPIATTITY
MVNATFTSTPSPFNVAEANAGGTNTGVDGFVRVETAGPDTPLTAALKVVLEISDTFPVSAGNANGSFAACNSTDGTDKVS
ATVNHTVPFDQNVWACHYVNDGSDDTFTVRAHWDVNGNGIVDTGEPQISGSPITVTIVDS
>Mature_460_residues
MRFSRPFRPDGDSRLGRLRRWAGTRRGTTVLITLALVLALALPTVAQQWVGAGHKMPKLPPESAIAPAAPKSGDCQYFPE
TQHNLCGEFRAYWNRTGGLMIHGYPLTEEYYAPELGVVTQWFERSRLEFHPNNPPQFRVLQGHVSREILAMLQAGWTGTP
GATPTPYPTYTPYPTYTPYPTYTPYPTYTPFPPPPTPPPTPPSGYVLTITPASDTRVLGLDPDGVGSLTANQRRVTAKLT
LGGSPVVGQNIIFTVSVTGGTIAPTAPQTVATNALGEASVVYTFTDDATVGGYYVVTACADVSAPFGACSGEPIATTITY
MVNATFTSTPSPFNVAEANAGGTNTGVDGFVRVETAGPDTPLTAALKVVLEISDTFPVSAGNANGSFAACNSTDGTDKVS
ATVNHTVPFDQNVWACHYVNDGSDDTFTVRAHWDVNGNGIVDTGEPQISGSPITVTIVDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48852; Mature: 48852

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00144 ASN_GLN_ASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSRPFRPDGDSRLGRLRRWAGTRRGTTVLITLALVLALALPTVAQQWVGAGHKMPKLP
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PESAIAPAAPKSGDCQYFPETQHNLCGEFRAYWNRTGGLMIHGYPLTEEYYAPELGVVTQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHH
WFERSRLEFHPNNPPQFRVLQGHVSREILAMLQAGWTGTPGATPTPYPTYTPYPTYTPYP
HHHCCCCEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TYTPYPTYTPFPPPPTPPPTPPSGYVLTITPASDTRVLGLDPDGVGSLTANQRRVTAKLT
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEE
LGGSPVVGQNIIFTVSVTGGTIAPTAPQTVATNALGEASVVYTFTDDATVGGYYVVTACA
ECCCCCCCCEEEEEEEECCCEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEE
DVSAPFGACSGEPIATTITYMVNATFTSTPSPFNVAEANAGGTNTGVDGFVRVETAGPDT
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCC
PLTAALKVVLEISDTFPVSAGNANGSFAACNSTDGTDKVSATVNHTVPFDQNVWACHYVN
CHHHHEEEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEC
DGSDDTFTVRAHWDVNGNGIVDTGEPQISGSPITVTIVDS
CCCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRFSRPFRPDGDSRLGRLRRWAGTRRGTTVLITLALVLALALPTVAQQWVGAGHKMPKLP
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PESAIAPAAPKSGDCQYFPETQHNLCGEFRAYWNRTGGLMIHGYPLTEEYYAPELGVVTQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHH
WFERSRLEFHPNNPPQFRVLQGHVSREILAMLQAGWTGTPGATPTPYPTYTPYPTYTPYP
HHHCCCCEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TYTPYPTYTPFPPPPTPPPTPPSGYVLTITPASDTRVLGLDPDGVGSLTANQRRVTAKLT
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEE
LGGSPVVGQNIIFTVSVTGGTIAPTAPQTVATNALGEASVVYTFTDDATVGGYYVVTACA
ECCCCCCCCEEEEEEEECCCEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEE
DVSAPFGACSGEPIATTITYMVNATFTSTPSPFNVAEANAGGTNTGVDGFVRVETAGPDT
CCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCC
PLTAALKVVLEISDTFPVSAGNANGSFAACNSTDGTDKVSATVNHTVPFDQNVWACHYVN
CHHHHEEEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEC
DGSDDTFTVRAHWDVNGNGIVDTGEPQISGSPITVTIVDS
CCCCCEEEEEEEEECCCCEEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA