| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is gmk [H]
Identifier: 221633591
GI number: 221633591
Start: 1609918
End: 1610571
Strand: Reverse
Name: gmk [H]
Synonym: trd_1615
Alternate gene names: 221633591
Gene position: 1610571-1609918 (Counterclockwise)
Preceding gene: 221633593
Following gene: 221633587
Centisome position: 80.41
GC content: 62.69
Gene sequence:
>654_bases GTGACGGACGACCTCGGATTGAATACGCAGGCCGATGAACTCCTCGAAGAACTCCGGCAGCGTGTCCGTCCCAAGTTGAT CGTCATCTCCGGACCATCCGGTGTCGGCAAGGACACCGTCATCGAGCGGATGCGTCAAGCGCATCCCGAGTTCCATTTCG CGGTCACCGCGACCACGCGTCCGCGTCGGCCTGGTGAGATCGACGGTGTCCATTACATTTTCATGACGCGCGAGGAGTTC TTGGCCGCTCGTGACCGTGGCGAATTTCTCGAGTCGGCGGAGGTCTACGGACATCTCTACGGTGTCCCCAAGGAGCGGGT GCGCCGCGCCTTGCGCAGCGGCAAGACGGTGGTCGTCAAAGTCGACGTGCAGGGAGCAGCGTCGATCCGGCGGCTCGTGC CGCAGGCGATCCTGATCTTCCTCGCCCCACCCTCGATGTCCGAACTGATGCACCGCTTGCGCAGCCGCAAGACGGACGAT CCGACCACGCTCATGGAGCGGATCGCGACCGCATCCCGGGAACTCGCTCAGGTTTACGAGTTCGACTACGTCGTCTTCAA CGAGACGGATCGGTTGGACCAGACGCTTGCCACGATCGACGCGATCCTCGTTGCGGAGCAGAGCCGCGTCCATCAGGCCG AAATCGTGCTCTGA
Upstream 100 bases:
>100_bases TTCGAGTCCGACGAGCGTTCCCAACTATGGCACAATGACGACAGGTGGCCGATCCGAGCCACCCCAGGGTGGGAGCGGAC AGCAGGGGAGGTCCGGGCCG
Downstream 100 bases:
>100_bases GGTTCACGTCCCGGTCGCCGCTTCGGCGGTCTCTTCTTCCTCGTCCGGGATGTAGCGCAGCGTCGACCGATCTTCGATCC GGTCGACGAAGAGAATACCC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTDDLGLNTQADELLEELRQRVRPKLIVISGPSGVGKDTVIERMRQAHPEFHFAVTATTRPRRPGEIDGVHYIFMTREEF LAARDRGEFLESAEVYGHLYGVPKERVRRALRSGKTVVVKVDVQGAASIRRLVPQAILIFLAPPSMSELMHRLRSRKTDD PTTLMERIATASRELAQVYEFDYVVFNETDRLDQTLATIDAILVAEQSRVHQAEIVL
Sequences:
>Translated_217_residues MTDDLGLNTQADELLEELRQRVRPKLIVISGPSGVGKDTVIERMRQAHPEFHFAVTATTRPRRPGEIDGVHYIFMTREEF LAARDRGEFLESAEVYGHLYGVPKERVRRALRSGKTVVVKVDVQGAASIRRLVPQAILIFLAPPSMSELMHRLRSRKTDD PTTLMERIATASRELAQVYEFDYVVFNETDRLDQTLATIDAILVAEQSRVHQAEIVL >Mature_216_residues TDDLGLNTQADELLEELRQRVRPKLIVISGPSGVGKDTVIERMRQAHPEFHFAVTATTRPRRPGEIDGVHYIFMTREEFL AARDRGEFLESAEVYGHLYGVPKERVRRALRSGKTVVVKVDVQGAASIRRLVPQAILIFLAPPSMSELMHRLRSRKTDDP TTLMERIATASRELAQVYEFDYVVFNETDRLDQTLATIDAILVAEQSRVHQAEIVL
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=187, Percent_Identity=39.0374331550802, Blast_Score=119, Evalue=1e-27, Organism=Homo sapiens, GI4504221, Length=187, Percent_Identity=39.0374331550802, Blast_Score=119, Evalue=1e-27, Organism=Homo sapiens, GI226874831, Length=187, Percent_Identity=39.0374331550802, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI38570142, Length=172, Percent_Identity=33.1395348837209, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI14780902, Length=203, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI21361598, Length=182, Percent_Identity=27.4725274725275, Blast_Score=64, Evalue=7e-11, Organism=Escherichia coli, GI1790080, Length=187, Percent_Identity=38.5026737967914, Blast_Score=136, Evalue=1e-33, Organism=Caenorhabditis elegans, GI193203132, Length=172, Percent_Identity=37.7906976744186, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17508835, Length=172, Percent_Identity=37.7906976744186, Blast_Score=106, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71988041, Length=186, Percent_Identity=27.9569892473118, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71988048, Length=186, Percent_Identity=27.9569892473118, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17557440, Length=188, Percent_Identity=30.3191489361702, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17556244, Length=122, Percent_Identity=34.4262295081967, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=190, Percent_Identity=36.3157894736842, Blast_Score=123, Evalue=3e-29, Organism=Drosophila melanogaster, GI21356141, Length=153, Percent_Identity=40.5228758169935, Blast_Score=113, Evalue=8e-26, Organism=Drosophila melanogaster, GI221330164, Length=121, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI221330166, Length=121, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI221330162, Length=121, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI116007136, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI85724806, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI45554489, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI45554481, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24640542, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI161077626, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24648808, Length=190, Percent_Identity=26.8421052631579, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI281362230, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI161078487, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI161078485, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648810, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362232, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85816106, Length=147, Percent_Identity=32.6530612244898, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85816281, Length=147, Percent_Identity=32.6530612244898, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45551002, Length=147, Percent_Identity=32.6530612244898, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 24623; Mature: 24491
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDLGLNTQADELLEELRQRVRPKLIVISGPSGVGKDTVIERMRQAHPEFHFAVTATTR CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCC PRRPGEIDGVHYIFMTREEFLAARDRGEFLESAEVYGHLYGVPKERVRRALRSGKTVVVK CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEE VDVQGAASIRRLVPQAILIFLAPPSMSELMHRLRSRKTDDPTTLMERIATASRELAQVYE EECCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FDYVVFNETDRLDQTLATIDAILVAEQSRVHQAEIVL HCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDDLGLNTQADELLEELRQRVRPKLIVISGPSGVGKDTVIERMRQAHPEFHFAVTATTR CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCC PRRPGEIDGVHYIFMTREEFLAARDRGEFLESAEVYGHLYGVPKERVRRALRSGKTVVVK CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEE VDVQGAASIRRLVPQAILIFLAPPSMSELMHRLRSRKTDDPTTLMERIATASRELAQVYE EECCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FDYVVFNETDRLDQTLATIDAILVAEQSRVHQAEIVL HCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA