| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633585
Identifier: 221633585
GI number: 221633585
Start: 1603189
End: 1603434
Strand: Reverse
Name: 221633585
Synonym: trd_1608
Alternate gene names: NA
Gene position: 1603434-1603189 (Counterclockwise)
Preceding gene: 221633587
Following gene: 221633576
Centisome position: 80.05
GC content: 69.11
Gene sequence:
>246_bases ATGCGTCCCGCTCATCGTTCCCACCTCGCCCCGGTCACTCGTCTGACGACGAACACACTGTGCTCCCCGCTCGGCGCAGG ATCGCCGGTCATCGTAGCACACGCCCGCGCTGTCCGGTTCCCCGGCCGCTCCTCTCCAGACCCGATCGTGGGGGGGAAAC CGGTTGCGGCTCGACCGAGAAGCGCGCGATGGCGCGCCTTCAGCTGCCCCGGCTGCTCAGGGTCACGGCACTCAGAAAGC GGCTGA
Upstream 100 bases:
>100_bases CCTCGAACACGGCACCGACCGTCGACCAGCCGAGTTCGGTCACGTGGACAGTCGCCTCTTCCCAGCGTACCTGCTGGCCA TTCCACCAGAGATAACGAGG
Downstream 100 bases:
>100_bases ACGATCTCTCCGGGTCGAGCAGTTCCCCAGTCGGCGTGCGCGGAAGCGTCACGACCCAGGGCTGCACGAGATACGTCGCG ACGGGATGACAGATCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MRPAHRSHLAPVTRLTTNTLCSPLGAGSPVIVAHARAVRFPGRSSPDPIVGGKPVAARPRSARWRAFSCPGCSGSRHSES G
Sequences:
>Translated_81_residues MRPAHRSHLAPVTRLTTNTLCSPLGAGSPVIVAHARAVRFPGRSSPDPIVGGKPVAARPRSARWRAFSCPGCSGSRHSES G >Mature_81_residues MRPAHRSHLAPVTRLTTNTLCSPLGAGSPVIVAHARAVRFPGRSSPDPIVGGKPVAARPRSARWRAFSCPGCSGSRHSES G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8467; Mature: 8467
Theoretical pI: Translated: 12.42; Mature: 12.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAHRSHLAPVTRLTTNTLCSPLGAGSPVIVAHARAVRFPGRSSPDPIVGGKPVAARPR CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCC SARWRAFSCPGCSGSRHSESG CCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRPAHRSHLAPVTRLTTNTLCSPLGAGSPVIVAHARAVRFPGRSSPDPIVGGKPVAARPR CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCC SARWRAFSCPGCSGSRHSESG CCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA