Click here to switch to the map view.

The map label for this gene is dapB

Identifier: 221633439

GI number: 221633439

Start: 1448829

End: 1449833

Strand: Reverse

Name: dapB

Synonym: trd_1461

Alternate gene names: NA

Gene position: 1449833-1448829 (Counterclockwise)

Preceding gene: 221633440

Following gene: 221633438

Centisome position: 72.38

GC content: 65.07

Gene sequence:

>1005_bases
GTGAGCGAGCGGGTCTATCGGGTCGTGCAGTACGGGATGGGGCCGATCGGTCAAGAGCTGGCGCGACTCGCTCTGGAGCG
TCGATCGTACGAGTTGGTGGGCGCCATCGATATCGATCCGGCGAAGGTCGGTCGCGATGTCGGCGAGTTGCTCGGTCTCG
AGGGGCCGGTCGGTGTCCTGGTACGGGCCGATGCGGAAGCAGTCTTGGCCGAGACGCGACCCGATTGCGTCCTGCATACC
ACTGGATCCTACCTGGATCGGGTCTTTCCACAACTCGAATCGATCGTCAGGGCCGGCTGCAACGTCGTTTCCACGTGCGA
GGAACTGTCTTTCCCCGCTGCTGGCCATCCGGAATTGGCCGCGCGGCTCGATGGGCTGGCCCGCGAGTACGGCGTCACGG
TGCTCGGTACCGGCGTCAATCCCGGCTATGTGATGGACACGCTTCCGCTCTTTTTCTCGGGTGTCGCCCAGCAGGTGACC
GCAGTGCGAGTGGAGCGGATCCAGAACGCGTCGACGCGGCGCAAACCGTTGCAGGAGAAGATCGGGTCAGGCAAGACGGT
CGAGGAGTTCCAGCAACTGGCCGCGGCCGGAACGGTGCGCCACGTGGGGCTGCGCGAATCGGCCTACCTCATCGCCGCGG
GGCTCGGCTGGCGGATCGAGCGCTACGAGGAGCGGATCGAACCGGTAATCGCTGAGCGTCGGATCGAGACGCGCTACTTC
ACGGTGGAGCCAGGACGGGTGTGCGGTGTCGACCAGCTCGGCCGGGCTTTCGTCGAGGGTGAAGAACGGATCACGTTGCA
CTTGCGCATGTATCTCGATGCCGATCCGGCCTATGATCGTGTGCTCCTCGAGGGGACGACCCCGTTGGAACTGGTCATTC
CCGGTGGTCTCCAGGGCGACCGGGCAACGACCGCGATCGCCCTCAATGCGGTGCCGCGGGTGGTCGCCCATGCCCCCGGG
CTGGTGACGATGGTCGATCTCCCCATCATCACTGTTCGTTCGTGA

Upstream 100 bases:

>100_bases
CGCTGCCCAAGCCGAAGAAGTATTACCGCCAGCTCAAGGAGCGGGAACGCCGTAATCCGGAAGAGTCCTGAGGGTCAGTG
ACAGGCGAGGGGGACAGGCT

Downstream 100 bases:

>100_bases
TTCGCGTGCTCGCTGGATTGACGGTACGAGGGGGTCGCTTCGATGGTCCTGCCGAACCAGATCGATCGTGTCGCAGTCTT
TTTCGATATGTCCAACCTCT

Product: Dihydrodipicolinate reductase, N-terminus domain-containing protein

Products: NA

Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Oxidoreductase; Oxidoreductase Domain Protein; (2r 4S)-2 4-Diaminopentanoate Dehydrogenase; Ypothetical Protein SMU.; Dihydropicolinate Reductase

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSERVYRVVQYGMGPIGQELARLALERRSYELVGAIDIDPAKVGRDVGELLGLEGPVGVLVRADAEAVLAETRPDCVLHT
TGSYLDRVFPQLESIVRAGCNVVSTCEELSFPAAGHPELAARLDGLAREYGVTVLGTGVNPGYVMDTLPLFFSGVAQQVT
AVRVERIQNASTRRKPLQEKIGSGKTVEEFQQLAAAGTVRHVGLRESAYLIAAGLGWRIERYEERIEPVIAERRIETRYF
TVEPGRVCGVDQLGRAFVEGEERITLHLRMYLDADPAYDRVLLEGTTPLELVIPGGLQGDRATTAIALNAVPRVVAHAPG
LVTMVDLPIITVRS

Sequences:

>Translated_334_residues
MSERVYRVVQYGMGPIGQELARLALERRSYELVGAIDIDPAKVGRDVGELLGLEGPVGVLVRADAEAVLAETRPDCVLHT
TGSYLDRVFPQLESIVRAGCNVVSTCEELSFPAAGHPELAARLDGLAREYGVTVLGTGVNPGYVMDTLPLFFSGVAQQVT
AVRVERIQNASTRRKPLQEKIGSGKTVEEFQQLAAAGTVRHVGLRESAYLIAAGLGWRIERYEERIEPVIAERRIETRYF
TVEPGRVCGVDQLGRAFVEGEERITLHLRMYLDADPAYDRVLLEGTTPLELVIPGGLQGDRATTAIALNAVPRVVAHAPG
LVTMVDLPIITVRS
>Mature_333_residues
SERVYRVVQYGMGPIGQELARLALERRSYELVGAIDIDPAKVGRDVGELLGLEGPVGVLVRADAEAVLAETRPDCVLHTT
GSYLDRVFPQLESIVRAGCNVVSTCEELSFPAAGHPELAARLDGLAREYGVTVLGTGVNPGYVMDTLPLFFSGVAQQVTA
VRVERIQNASTRRKPLQEKIGSGKTVEEFQQLAAAGTVRHVGLRESAYLIAAGLGWRIERYEERIEPVIAERRIETRYFT
VEPGRVCGVDQLGRAFVEGEERITLHLRMYLDADPAYDRVLLEGTTPLELVIPGGLQGDRATTAIALNAVPRVVAHAPGL
VTMVDLPIITVRS

Specific function: Unknown

COG id: COG3804

COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36352; Mature: 36221

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERVYRVVQYGMGPIGQELARLALERRSYELVGAIDIDPAKVGRDVGELLGLEGPVGVL
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCCCCEEE
VRADAEAVLAETRPDCVLHTTGSYLDRVFPQLESIVRAGCNVVSTCEELSFPAAGHPELA
EECCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
ARLDGLAREYGVTVLGTGVNPGYVMDTLPLFFSGVAQQVTAVRVERIQNASTRRKPLQEK
HHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGSGKTVEEFQQLAAAGTVRHVGLRESAYLIAAGLGWRIERYEERIEPVIAERRIETRYF
HCCCCCHHHHHHHHHHCCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEE
TVEPGRVCGVDQLGRAFVEGEERITLHLRMYLDADPAYDRVLLEGTTPLELVIPGGLQGD
EECCCCEECHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCC
RATTAIALNAVPRVVAHAPGLVTMVDLPIITVRS
CHHHEEEHHHHHHHHHCCCCEEEEEECCEEEECC
>Mature Secondary Structure 
SERVYRVVQYGMGPIGQELARLALERRSYELVGAIDIDPAKVGRDVGELLGLEGPVGVL
CHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCCCCEEE
VRADAEAVLAETRPDCVLHTTGSYLDRVFPQLESIVRAGCNVVSTCEELSFPAAGHPELA
EECCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
ARLDGLAREYGVTVLGTGVNPGYVMDTLPLFFSGVAQQVTAVRVERIQNASTRRKPLQEK
HHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGSGKTVEEFQQLAAAGTVRHVGLRESAYLIAAGLGWRIERYEERIEPVIAERRIETRYF
HCCCCCHHHHHHHHHHCCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEE
TVEPGRVCGVDQLGRAFVEGEERITLHLRMYLDADPAYDRVLLEGTTPLELVIPGGLQGD
EECCCCEECHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCCCC
RATTAIALNAVPRVVAHAPGLVTMVDLPIITVRS
CHHHEEEHHHHHHHHHCCCCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA