The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633417

Identifier: 221633417

GI number: 221633417

Start: 1430761

End: 1432548

Strand: Reverse

Name: 221633417

Synonym: trd_1439

Alternate gene names: NA

Gene position: 1432548-1430761 (Counterclockwise)

Preceding gene: 221633424

Following gene: 221633412

Centisome position: 71.52

GC content: 66.89

Gene sequence:

>1788_bases
ATGCACAGGAGTCCTTTGGGCAACCAGGTACGGCTCGGCGTGCTTCTCGTCCTGCTCCTCGCTCTTGCGCTGCCGCTCCT
CCCAGCGCGGGCGCAAGTGACGACCGACGGGTGGAGCGGCACGGTAGAGCCGTGCGGGAACGGCTTCGCGACCCAGACCT
TCGGCCCTGGTCCGGCCTCGCCACCGCACGGAACGGGCAGTCTCCAATTTTCGGTCGCCGCTGTGGATGACGGGAAGGTC
TGGTCGCAGTTCGTGCAGCGGGGGGTTGTCGAAACTCCCCTGACCGCGATCAGCGAGCTCCGCTACTGGACCTTCGTGAG
CCGGGGCGCCGGCCATGCGCCGCACCTCTTCCTCGATGTCGATCTGAACGGGGACGGGGTGGCCGACGATCGCCTGATCT
ACCAGCCCGAGCTCAATGGGACGGTTACCCCGCTCACCTGGCAGGAGTGGAGTGCCGCCGGTGGGCGCTGGTGGTCGCAG
CGAGGGTTGGGGGGATTGCTGCAGGGCGCACCGGGGCTGCTGACGAGCTATGCGCTGGCTTTTCCGAATGCGCGACTCGC
GCTACCGGAAGGAGGTCAAGGTGGGCTCGGTATCGGCGTCGGCTGCTTGGGCAGCGGGTGGGGAGGCTGGCAGGGAGCGG
TCGACGCCCTCGTATTCCGGGCCGGGACGCTTTCGTTCTTCTGGGACTTCGAGGCCACCGGCGTAGTGACGACCCGCGGA
GGCGGGGTACGGGAAGGGCCCACCTTCCGCGACCTGCGTCCGGCACCCTGGTCGACAGTGGCGCCGGGGCCGGTGACCAT
CGCCGTGACGGCGACCACTCCGAGCGGCCTGCGTTCCGTCCGCTTGTCGCTCGATGGTCGGGAACTACCGGTCACGGAGA
GCGGTGACCGCAACACCCGGACCGTCAGCACGCAGCTCACGCTCCAACCCGGCTTTTTCGTCGTCACGGCCATCGCGACC
GACGAGCTGGGCCGGAGCTTCACCGCCCAGTGGCAGTTCGTCGTGTCGCCCGATCCGCGAGACAGCTGGTGGTTCAGGGC
CGACGGGACACCACGGCAGCAGCAGATCACTGCCTCCCTGCGGGCGCTCAGCGAAGCGTTCCGCTGGCACTTCTTCGGTT
ACTCCTGGGATGGAGCCTATCACCCGGAAATGCCGACCCATGCCTCGGTCGCCTCCACACTGCGCGTAGTGACGCGCTCG
CCCATGCACTTCGGGACACTGTCGCCGACCGAGCCGATCATGATCTCGGCCGCAGTCGTCTCGAGCGAGAGCCCGCTCGC
CAGCGTCGAACTCACGCTCAACGGTCAGCCGCTCGACGTAGAGATTTCCCGCGACGACGAGCGGCGCTGGCTGGTCTACG
CGATACGAACGCTGAGCCCTGGTACCTATGGAGTGACTGCGACGGTCCGCGACACGGCCGGCCGTCGTTTCACGACCGTG
TGGGGCTTCGTCGTCTCCAGCGATGCTAACGAGAATCCCTGGTTCTATCCGGATGGCCGCATGAAAGCCGAAGTGGTGAC
GCGTACCTTGCGGACGCTGGTCGAGGGCTGGCGCTGGCATACGCGCGGACAGTCGTGGGATGGCAAACCCCACCCGGAGT
TCCCGACGCATTCCACCGGCGTGAGCGGTGCAGAACCGTTGCCGCAGTGGTTCGATGCCCAAGGACGCCCGAACCAGCAA
GCGATCAGCGACACGCTGCGCATGCTCGAGCAAGAGTTCCGCTGGCACTTCTGGGGAATCAGCTGGGACGGCAATCGCCA
TCCCGAGATTCCGACGCATGCCGATTGA

Upstream 100 bases:

>100_bases
CTTGCCAGGCGAGAAGAGGTCGGCTAGGCTAGGGGGGACATCTCCCTCACGAGGGATGGACCGCGCGCATCGCTGGAGCG
CGGGAAGGGGAGGGTGATCG

Downstream 100 bases:

>100_bases
GACAGCGGGCAACGAGCGGGGGTCGTCAGTCGACCGACGACCCCCGCTCCGCGTCGTGCGTGGACGGCCGGTTCTACGGA
CTCAGGCGGTAATTGGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Trypsin Domain Protein

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MHRSPLGNQVRLGVLLVLLLALALPLLPARAQVTTDGWSGTVEPCGNGFATQTFGPGPASPPHGTGSLQFSVAAVDDGKV
WSQFVQRGVVETPLTAISELRYWTFVSRGAGHAPHLFLDVDLNGDGVADDRLIYQPELNGTVTPLTWQEWSAAGGRWWSQ
RGLGGLLQGAPGLLTSYALAFPNARLALPEGGQGGLGIGVGCLGSGWGGWQGAVDALVFRAGTLSFFWDFEATGVVTTRG
GGVREGPTFRDLRPAPWSTVAPGPVTIAVTATTPSGLRSVRLSLDGRELPVTESGDRNTRTVSTQLTLQPGFFVVTAIAT
DELGRSFTAQWQFVVSPDPRDSWWFRADGTPRQQQITASLRALSEAFRWHFFGYSWDGAYHPEMPTHASVASTLRVVTRS
PMHFGTLSPTEPIMISAAVVSSESPLASVELTLNGQPLDVEISRDDERRWLVYAIRTLSPGTYGVTATVRDTAGRRFTTV
WGFVVSSDANENPWFYPDGRMKAEVVTRTLRTLVEGWRWHTRGQSWDGKPHPEFPTHSTGVSGAEPLPQWFDAQGRPNQQ
AISDTLRMLEQEFRWHFWGISWDGNRHPEIPTHAD

Sequences:

>Translated_595_residues
MHRSPLGNQVRLGVLLVLLLALALPLLPARAQVTTDGWSGTVEPCGNGFATQTFGPGPASPPHGTGSLQFSVAAVDDGKV
WSQFVQRGVVETPLTAISELRYWTFVSRGAGHAPHLFLDVDLNGDGVADDRLIYQPELNGTVTPLTWQEWSAAGGRWWSQ
RGLGGLLQGAPGLLTSYALAFPNARLALPEGGQGGLGIGVGCLGSGWGGWQGAVDALVFRAGTLSFFWDFEATGVVTTRG
GGVREGPTFRDLRPAPWSTVAPGPVTIAVTATTPSGLRSVRLSLDGRELPVTESGDRNTRTVSTQLTLQPGFFVVTAIAT
DELGRSFTAQWQFVVSPDPRDSWWFRADGTPRQQQITASLRALSEAFRWHFFGYSWDGAYHPEMPTHASVASTLRVVTRS
PMHFGTLSPTEPIMISAAVVSSESPLASVELTLNGQPLDVEISRDDERRWLVYAIRTLSPGTYGVTATVRDTAGRRFTTV
WGFVVSSDANENPWFYPDGRMKAEVVTRTLRTLVEGWRWHTRGQSWDGKPHPEFPTHSTGVSGAEPLPQWFDAQGRPNQQ
AISDTLRMLEQEFRWHFWGISWDGNRHPEIPTHAD
>Mature_595_residues
MHRSPLGNQVRLGVLLVLLLALALPLLPARAQVTTDGWSGTVEPCGNGFATQTFGPGPASPPHGTGSLQFSVAAVDDGKV
WSQFVQRGVVETPLTAISELRYWTFVSRGAGHAPHLFLDVDLNGDGVADDRLIYQPELNGTVTPLTWQEWSAAGGRWWSQ
RGLGGLLQGAPGLLTSYALAFPNARLALPEGGQGGLGIGVGCLGSGWGGWQGAVDALVFRAGTLSFFWDFEATGVVTTRG
GGVREGPTFRDLRPAPWSTVAPGPVTIAVTATTPSGLRSVRLSLDGRELPVTESGDRNTRTVSTQLTLQPGFFVVTAIAT
DELGRSFTAQWQFVVSPDPRDSWWFRADGTPRQQQITASLRALSEAFRWHFFGYSWDGAYHPEMPTHASVASTLRVVTRS
PMHFGTLSPTEPIMISAAVVSSESPLASVELTLNGQPLDVEISRDDERRWLVYAIRTLSPGTYGVTATVRDTAGRRFTTV
WGFVVSSDANENPWFYPDGRMKAEVVTRTLRTLVEGWRWHTRGQSWDGKPHPEFPTHSTGVSGAEPLPQWFDAQGRPNQQ
AISDTLRMLEQEFRWHFWGISWDGNRHPEIPTHAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64916; Mature: 64916

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSPLGNQVRLGVLLVLLLALALPLLPARAQVTTDGWSGTVEPCGNGFATQTFGPGPAS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCC
PPHGTGSLQFSVAAVDDGKVWSQFVQRGVVETPLTAISELRYWTFVSRGAGHAPHLFLDV
CCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEE
DLNGDGVADDRLIYQPELNGTVTPLTWQEWSAAGGRWWSQRGLGGLLQGAPGLLTSYALA
EECCCCCCCCEEEECCCCCCEECCEEHHHHCCCCCCCHHHCCCCHHHCCCCHHHHHHHHH
FPNARLALPEGGQGGLGIGVGCLGSGWGGWQGAVDALVFRAGTLSFFWDFEATGVVTTRG
CCCCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEECC
GGVREGPTFRDLRPAPWSTVAPGPVTIAVTATTPSGLRSVRLSLDGRELPVTESGDRNTR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCE
TVSTQLTLQPGFFVVTAIATDELGRSFTAQWQFVVSPDPRDSWWFRADGTPRQQQITASL
EEEEEEEECCCEEEEEEEEHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHH
RALSEAFRWHFFGYSWDGAYHPEMPTHASVASTLRVVTRSPMHFGTLSPTEPIMISAAVV
HHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
SSESPLASVELTLNGQPLDVEISRDDERRWLVYAIRTLSPGTYGVTATVRDTAGRRFTTV
CCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEE
WGFVVSSDANENPWFYPDGRMKAEVVTRTLRTLVEGWRWHTRGQSWDGKPHPEFPTHSTG
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
VSGAEPLPQWFDAQGRPNQQAISDTLRMLEQEFRWHFWGISWDGNRHPEIPTHAD
CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MHRSPLGNQVRLGVLLVLLLALALPLLPARAQVTTDGWSGTVEPCGNGFATQTFGPGPAS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCC
PPHGTGSLQFSVAAVDDGKVWSQFVQRGVVETPLTAISELRYWTFVSRGAGHAPHLFLDV
CCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEEEE
DLNGDGVADDRLIYQPELNGTVTPLTWQEWSAAGGRWWSQRGLGGLLQGAPGLLTSYALA
EECCCCCCCCEEEECCCCCCEECCEEHHHHCCCCCCCHHHCCCCHHHCCCCHHHHHHHHH
FPNARLALPEGGQGGLGIGVGCLGSGWGGWQGAVDALVFRAGTLSFFWDFEATGVVTTRG
CCCCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEECC
GGVREGPTFRDLRPAPWSTVAPGPVTIAVTATTPSGLRSVRLSLDGRELPVTESGDRNTR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCE
TVSTQLTLQPGFFVVTAIATDELGRSFTAQWQFVVSPDPRDSWWFRADGTPRQQQITASL
EEEEEEEECCCEEEEEEEEHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHH
RALSEAFRWHFFGYSWDGAYHPEMPTHASVASTLRVVTRSPMHFGTLSPTEPIMISAAVV
HHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
SSESPLASVELTLNGQPLDVEISRDDERRWLVYAIRTLSPGTYGVTATVRDTAGRRFTTV
CCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEE
WGFVVSSDANENPWFYPDGRMKAEVVTRTLRTLVEGWRWHTRGQSWDGKPHPEFPTHSTG
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC
VSGAEPLPQWFDAQGRPNQQAISDTLRMLEQEFRWHFWGISWDGNRHPEIPTHAD
CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA