Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633403

Identifier: 221633403

GI number: 221633403

Start: 1417696

End: 1417905

Strand: Reverse

Name: 221633403

Synonym: trd_1423

Alternate gene names: NA

Gene position: 1417905-1417696 (Counterclockwise)

Preceding gene: 221633404

Following gene: 221633402

Centisome position: 70.79

GC content: 60.0

Gene sequence:

>210_bases
ATGACGGGATACAAGGCACTGACGCCGCGCCCCGATGAGCAGTTCGATCTTCTGCAGCTGGAGGCGATGGGGTTTACGCC
CGATCAGATTGCCCGGCTGCGGGAGCTGCGGGACATGTACCCCTACATCGAGTACATGGATTCCCGAAAGCAGTGGAACC
GGTTGCGCTTCGTCAAGTGGCTCTACTCGCGGGGTGCTATCCCGCGATAA

Upstream 100 bases:

>100_bases
GGTTCTCTGCTATACTTCTGGTGCGAGTCGGCCGATCTCATCGGAGACGGTGGCGACTCGACACCGCGCGCGGGGGCGCG
CGTGGACAGGGAGGCGAGCG

Downstream 100 bases:

>100_bases
GCGAAGAGGGATCGCTCGGGGCGGGGCGTCCTGCGCCCCGCTTTTTGTTTCCGCCCGGTCGGCTGTGTACACTTGCGGGG
CAACCAACGGCGGTTGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MTGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKWLYSRGAIPR

Sequences:

>Translated_69_residues
MTGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKWLYSRGAIPR
>Mature_68_residues
TGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKWLYSRGAIPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8444; Mature: 8313

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKW
CCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSRGAIPR
HHHCCCCCC
>Mature Secondary Structure 
TGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKW
CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSRGAIPR
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA