Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633399

Identifier: 221633399

GI number: 221633399

Start: 1414017

End: 1414166

Strand: Reverse

Name: 221633399

Synonym: trd_1419

Alternate gene names: NA

Gene position: 1414166-1414017 (Counterclockwise)

Preceding gene: 221633402

Following gene: 221633398

Centisome position: 70.6

GC content: 62.0

Gene sequence:

>150_bases
ATGAGCATGCGACGATGGGATGAGGAGCTCGGTCCGATCCGCGCGCCCGACTTTCCACCAGGACTCACCTGGCTGAACGT
CCGGCGACCGCTCGAGCTCACTGATCTGCGTGGCCGCTTGGTGATCCTCGACTTCTGGACGTATTGCTGA

Upstream 100 bases:

>100_bases
GCGGGCGATCCGAGATGGCGCCCGATGGCTGTCCGCTCACTGCATCGGGCGACGAGCAGACTTGTTATGCTGGAACGAGA
GCGCGACCGACGAACGGGGG

Downstream 100 bases:

>100_bases
ATCAACTGCCTGCACGTCCTGCCCGCGTTGCGGGCGGTCGAGGAACGGTATCCGACCCAAGTCGTCGTCATCGGTGTCCA
TTCACCTAAGTTTCCCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 48

Protein sequence:

>49_residues
MSMRRWDEELGPIRAPDFPPGLTWLNVRRPLELTDLRGRLVILDFWTYC

Sequences:

>Translated_49_residues
MSMRRWDEELGPIRAPDFPPGLTWLNVRRPLELTDLRGRLVILDFWTYC
>Mature_48_residues
SMRRWDEELGPIRAPDFPPGLTWLNVRRPLELTDLRGRLVILDFWTYC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5903; Mature: 5772

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMRRWDEELGPIRAPDFPPGLTWLNVRRPLELTDLRGRLVILDFWTYC
CCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SMRRWDEELGPIRAPDFPPGLTWLNVRRPLELTDLRGRLVILDFWTYC
CCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA