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The map label for this gene is csoR [H]

Identifier: 221633395

GI number: 221633395

Start: 1411118

End: 1411429

Strand: Reverse

Name: csoR [H]

Synonym: trd_1415

Alternate gene names: 221633395

Gene position: 1411429-1411118 (Counterclockwise)

Preceding gene: 221633397

Following gene: 221633394

Centisome position: 70.47

GC content: 60.58

Gene sequence:

>312_bases
ATGGACGAGCGACGAGAGGAACCCAGCTGCGAGCGACGAGTCGATTCCTATCGGGCGGATAAGGCGCGCATCCTCGCTCG
CCTCCGCCGGATAGAAGGTCAAGTGCACGGCATCATCAGGATGGTGGAAGAGGATCGCTACTGCGTAGACATCCTCGTGC
AGCTTTCGTCGGTGATCGCGGCTGCTCGGAGCGTCGGTCTGTTGCTGTTGGAAGATCACATTCGCGGTTGCGTGCTGGGA
GCCGAGGACAAGGAAGCAGCGATCCAGGAATTGACGGAAGCCATCGAACGGTTCACCCGCAGCGTGGGCTGA

Upstream 100 bases:

>100_bases
ATCGCTCGAGAGCGTCCACCTCGAGTTTTTCGTTGTCGGCTCGACCACGGTCGTGTATGCTGAAGAGAGAATATACCCTA
GAGGGGTATATGGAGGAGTG

Downstream 100 bases:

>100_bases
ACGGCCGAGGGGGACACGATGAGCGATCCGCGTGAACAGCGACGAGCCGAGTCGACTCCAGTCGTGCGCCTGGCCATCGA
GGGGATGACGTGCGCTTCCT

Product: BCR family protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MDERREEPSCERRVDSYRADKARILARLRRIEGQVHGIIRMVEEDRYCVDILVQLSSVIAAARSVGLLLLEDHIRGCVLG
AEDKEAAIQELTEAIERFTRSVG

Sequences:

>Translated_103_residues
MDERREEPSCERRVDSYRADKARILARLRRIEGQVHGIIRMVEEDRYCVDILVQLSSVIAAARSVGLLLLEDHIRGCVLG
AEDKEAAIQELTEAIERFTRSVG
>Mature_103_residues
MDERREEPSCERRVDSYRADKARILARLRRIEGQVHGIIRMVEEDRYCVDILVQLSSVIAAARSVGLLLLEDHIRGCVLG
AEDKEAAIQELTEAIERFTRSVG

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 11723; Mature: 11723

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERREEPSCERRVDSYRADKARILARLRRIEGQVHGIIRMVEEDRYCVDILVQLSSVIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AARSVGLLLLEDHIRGCVLGAEDKEAAIQELTEAIERFTRSVG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDERREEPSCERRVDSYRADKARILARLRRIEGQVHGIIRMVEEDRYCVDILVQLSSVIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AARSVGLLLLEDHIRGCVLGAEDKEAAIQELTEAIERFTRSVG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]