| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is mhpF [C]
Identifier: 221633373
GI number: 221633373
Start: 1382460
End: 1383554
Strand: Reverse
Name: mhpF [C]
Synonym: trd_1393
Alternate gene names: 221633373
Gene position: 1383554-1382460 (Counterclockwise)
Preceding gene: 221633374
Following gene: 221633372
Centisome position: 69.07
GC content: 63.56
Gene sequence:
>1095_bases TTGTGCGGCCGCGCCGATCCGCGACGAGAGCGGTCACGTCATCGCGGCGATGAGTCTCTCGGTGCCGGCCTACCGCTTCT ATCCGAACCGACAGCGGCTCACCACCGCGATCGTCGATGCTGCGCGACGGGTTTCGGAAGAACTCGGGTACTATCAGGAG GATTGGGCATGGGAGAACGGCAAGCGGTCAAGGTCGCGATCCTCGGTACCGGGAATATCGGTACCGACCTGATGTACAAG CTCTTGCGGAATCCGGGCCACATGGAATTGGCCATGTTCGCCGGGATCGATCCGCAGTCGGAGGGGATCGCCCGCGCCAA GAAACTAGGTATCCCGACGAGCTACGAGGGGATCAAGGCGGTCCTGGATGACCCCGAGATCCGGATCGTGTTCGATGCCA CCAGCGCCAAAGCGCACGTTCGTCACGCCAAGATGCTGCGCGAGGCTGGCAAGATCGCGATCGATCTGACGCCAGCTGCC CGCGGTCCGTACGTCGTGCCGCCGGTCAACCTCGGCGCACACCTGGACAAGGACAACGTCAACCTGATCACTTGCGGCGG GCAGGCGACCATCCCGCTCGTCTTTGCTGTCAGTCGCGTCGTACCGGTGCGCTACGCCGAGATCGTCTCGACCGTCGCCA GCAAGTCGGCGGGACCAGGAACGCGGCAGAACATCGACGAGTTCACGTTCACGACCGCCCATGGGCTCGAGGCGATCGGG GGAGCTGAGCAGGGGAAGGCGATCATCATTCTCAACCCGGCTGAGCCGCCGATCATCATGCGCAATACCGTGTACGTCAT TCCCGCGAACGAGGAGTTCGACCAGGCGGCGATCGTGGCGTCGGTCGACCAGATGGTCGCCGAAGTGCAGCAATACGTCC CCGGGTATCGCCTCAAGGACGCGCCGGTCTTCGACCGGCGGCGCACACCGTGGGGCGAACGAACAATTATCGCCATGTTG CTCGAGGTCGAGGGGGCCGGTGATTTCTTGCCGCCCTATTCCGGCAATCTCGACATCATGACGGCAGCGGCCTGGCGGGT GGGTGAGTTGTTCGCCCAGCATTTGCTGGGTATCCGGCAGGAGGTGGCGGCATGA
Upstream 100 bases:
>100_bases CGAACACGATCAAGTCGGTCGAGCAGCTGCGCGAAGAACTGGAACGGGTCCGCCAGCAGGGGTTCGCCTATGACCAGGAA GAGGTGATGGTTGGGCTCTG
Downstream 100 bases:
>100_bases AGACGCTCACGCCACCGCGCGTGACCGACACGACGCTGCGGGACGGTTCCCATGCCATGCGGCACCAGTTCACGCGGGAG CAAGTGCGGGCCATCGTGGC
Product: acetaldehyde dehydrogenase
Products: NA
Alternate protein names: Acetaldehyde dehydrogenase [acetylating] [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MCGRADPRRERSRHRGDESLGAGLPLLSEPTAAHHRDRRCCATGFGRTRVLSGGLGMGERQAVKVAILGTGNIGTDLMYK LLRNPGHMELAMFAGIDPQSEGIARAKKLGIPTSYEGIKAVLDDPEIRIVFDATSAKAHVRHAKMLREAGKIAIDLTPAA RGPYVVPPVNLGAHLDKDNVNLITCGGQATIPLVFAVSRVVPVRYAEIVSTVASKSAGPGTRQNIDEFTFTTAHGLEAIG GAEQGKAIIILNPAEPPIIMRNTVYVIPANEEFDQAAIVASVDQMVAEVQQYVPGYRLKDAPVFDRRRTPWGERTIIAML LEVEGAGDFLPPYSGNLDIMTAAAWRVGELFAQHLLGIRQEVAA
Sequences:
>Translated_364_residues MCGRADPRRERSRHRGDESLGAGLPLLSEPTAAHHRDRRCCATGFGRTRVLSGGLGMGERQAVKVAILGTGNIGTDLMYK LLRNPGHMELAMFAGIDPQSEGIARAKKLGIPTSYEGIKAVLDDPEIRIVFDATSAKAHVRHAKMLREAGKIAIDLTPAA RGPYVVPPVNLGAHLDKDNVNLITCGGQATIPLVFAVSRVVPVRYAEIVSTVASKSAGPGTRQNIDEFTFTTAHGLEAIG GAEQGKAIIILNPAEPPIIMRNTVYVIPANEEFDQAAIVASVDQMVAEVQQYVPGYRLKDAPVFDRRRTPWGERTIIAML LEVEGAGDFLPPYSGNLDIMTAAAWRVGELFAQHLLGIRQEVAA >Mature_364_residues MCGRADPRRERSRHRGDESLGAGLPLLSEPTAAHHRDRRCCATGFGRTRVLSGGLGMGERQAVKVAILGTGNIGTDLMYK LLRNPGHMELAMFAGIDPQSEGIARAKKLGIPTSYEGIKAVLDDPEIRIVFDATSAKAHVRHAKMLREAGKIAIDLTPAA RGPYVVPPVNLGAHLDKDNVNLITCGGQATIPLVFAVSRVVPVRYAEIVSTVASKSAGPGTRQNIDEFTFTTAHGLEAIG GAEQGKAIIILNPAEPPIIMRNTVYVIPANEEFDQAAIVASVDQMVAEVQQYVPGYRLKDAPVFDRRRTPWGERTIIAML LEVEGAGDFLPPYSGNLDIMTAAAWRVGELFAQHLLGIRQEVAA
Specific function: Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG4569
COG function: function code Q; Acetaldehyde dehydrogenase (acetylating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetaldehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786547, Length=314, Percent_Identity=55.4140127388535, Blast_Score=322, Evalue=2e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003361 - InterPro: IPR015426 - InterPro: IPR016040 - InterPro: IPR000534 [H]
Pfam domain/function: PF09290 AcetDehyd-dimer; PF01118 Semialdhyde_dh [H]
EC number: =1.2.1.10 [H]
Molecular weight: Translated: 39196; Mature: 39196
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGRADPRRERSRHRGDESLGAGLPLLSEPTAAHHRDRRCCATGFGRTRVLSGGLGMGER CCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCCHHHHCCCCCCEEEECCCCCCCC QAVKVAILGTGNIGTDLMYKLLRNPGHMELAMFAGIDPQSEGIARAKKLGIPTSYEGIKA CEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHH VLDDPEIRIVFDATSAKAHVRHAKMLREAGKIAIDLTPAARGPYVVPPVNLGAHLDKDNV HCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCEECCCCE NLITCGGQATIPLVFAVSRVVPVRYAEIVSTVASKSAGPGTRQNIDEFTFTTAHGLEAIG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEHHHCHHHHC GAEQGKAIIILNPAEPPIIMRNTVYVIPANEEFDQAAIVASVDQMVAEVQQYVPGYRLKD CCCCCCEEEEECCCCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECC APVFDRRRTPWGERTIIAMLLEVEGAGDFLPPYSGNLDIMTAAAWRVGELFAQHLLGIRQ CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH EVAA HHCC >Mature Secondary Structure MCGRADPRRERSRHRGDESLGAGLPLLSEPTAAHHRDRRCCATGFGRTRVLSGGLGMGER CCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCHHHHCCCHHHHCCCCCCEEEECCCCCCCC QAVKVAILGTGNIGTDLMYKLLRNPGHMELAMFAGIDPQSEGIARAKKLGIPTSYEGIKA CEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHH VLDDPEIRIVFDATSAKAHVRHAKMLREAGKIAIDLTPAARGPYVVPPVNLGAHLDKDNV HCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCEECCCCE NLITCGGQATIPLVFAVSRVVPVRYAEIVSTVASKSAGPGTRQNIDEFTFTTAHGLEAIG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEHHHCHHHHC GAEQGKAIIILNPAEPPIIMRNTVYVIPANEEFDQAAIVASVDQMVAEVQQYVPGYRLKD CCCCCCEEEEECCCCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECC APVFDRRRTPWGERTIIAMLLEVEGAGDFLPPYSGNLDIMTAAAWRVGELFAQHLLGIRQ CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH EVAA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA