Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633358

Identifier: 221633358

GI number: 221633358

Start: 1369525

End: 1369884

Strand: Reverse

Name: 221633358

Synonym: trd_1378

Alternate gene names: NA

Gene position: 1369884-1369525 (Counterclockwise)

Preceding gene: 221633359

Following gene: 221633357

Centisome position: 68.39

GC content: 63.06

Gene sequence:

>360_bases
ATGGAATTGAGCGGACCAGCGAAGTGGCTCCGCATTTACATCGGCGAGCGGGATCATTGGCATGGAAAGCCGCTCTACGC
GGCGATCCTCGATCTCCTGCGTCACGAGGGGATCGCGGGTGCGACCGTGCATCGAGGGATCGCTGGATACGGCGCGAGCG
GCGCTGTTCACACCACGCGTGTTCTCCAGCTCTCGGTCGATCTCCCGGTCGTCATCGAGGTGATAGAGACAGCAGAGCGG
ATCGCGGCTGTCCTGCCACGACTGCGCGAAATGGTGAGCCAAGGATTGATCGTGCTGGTCGACTGCGAGGTGGTCCACCA
CCAAGCGGTTCGCCGATCGGGGGTCTCCGGGCAGAGCTGA

Upstream 100 bases:

>100_bases
CTGCCAGCGTTCCTCTATGGCTTCGGGTCGCTCGTCATCGGGGTGTTCTGCGCATGGCTCGGCAGTATCGTCGTTCGGTG
GGTATTCTGAGGGGCCAGCC

Downstream 100 bases:

>100_bases
GCGTACCCGGTTCCCTCCTCCCTGCGCCATATGCGAGAATTGCAACCGCCCGGTAGGCCGGGTAGCGACAGGCACACAGT
CGTGTGGGGGCGCGTGGCGA

Product: ACR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MELSGPAKWLRIYIGERDHWHGKPLYAAILDLLRHEGIAGATVHRGIAGYGASGAVHTTRVLQLSVDLPVVIEVIETAER
IAAVLPRLREMVSQGLIVLVDCEVVHHQAVRRSGVSGQS

Sequences:

>Translated_119_residues
MELSGPAKWLRIYIGERDHWHGKPLYAAILDLLRHEGIAGATVHRGIAGYGASGAVHTTRVLQLSVDLPVVIEVIETAER
IAAVLPRLREMVSQGLIVLVDCEVVHHQAVRRSGVSGQS
>Mature_119_residues
MELSGPAKWLRIYIGERDHWHGKPLYAAILDLLRHEGIAGATVHRGIAGYGASGAVHTTRVLQLSVDLPVVIEVIETAER
IAAVLPRLREMVSQGLIVLVDCEVVHHQAVRRSGVSGQS

Specific function: Unknown

COG id: COG1993

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0166 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003793
- InterPro:   IPR011322
- InterPro:   IPR015867 [H]

Pfam domain/function: PF02641 DUF190 [H]

EC number: NA

Molecular weight: Translated: 12946; Mature: 12946

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSGPAKWLRIYIGERDHWHGKPLYAAILDLLRHEGIAGATVHRGIAGYGASGAVHTTR
CCCCCHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHE
VLQLSVDLPVVIEVIETAERIAAVLPRLREMVSQGLIVLVDCEVVHHQAVRRSGVSGQS
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELSGPAKWLRIYIGERDHWHGKPLYAAILDLLRHEGIAGATVHRGIAGYGASGAVHTTR
CCCCCHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCHHHE
VLQLSVDLPVVIEVIETAERIAAVLPRLREMVSQGLIVLVDCEVVHHQAVRRSGVSGQS
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]