Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633339

Identifier: 221633339

GI number: 221633339

Start: 1350263

End: 1350652

Strand: Reverse

Name: 221633339

Synonym: trd_1359

Alternate gene names: NA

Gene position: 1350652-1350263 (Counterclockwise)

Preceding gene: 221633340

Following gene: 221633338

Centisome position: 67.43

GC content: 59.74

Gene sequence:

>390_bases
ATGGAGTGGGCCTTTTTGGCTGGTCGAGTGATTTTCGGGCTCTTCTTCGTGATCAACGGCGTCAATCACTTTGCGATGTG
GCGAGCGATGAGTGGCTATGCTGCATCCAAAGGAGTTCCAGCCCCGCAGGCCGCGGTCATCATCACCGGGATCATGCTGC
TTCTCGGTGGTGCGAGCGTCGCGACCGGGTACCAGCCGGTCATCGGTAATCTCCTTCTCATCATCTTTCTCGTGCCGGTT
GCCTTTTGGATGCACAACTTCTGGGCGGAGAGCGATCCCATGATGCGGGCCAATCAGATGGCACACTTCTTGAAGAATCT
CGCGCTGGCTGGCGCAGCGCTCGCTCTCCTCGGGGTGCCGACGCCGTGGCCGCTCAGCTTGGGGAGCTGA

Upstream 100 bases:

>100_bases
GGTGCGCAAGGATGCGGTGTGAGACAGCAGGGGCGGGGGCAACGAGAAGCCCCCGCTTCGCTTTCGCTGCAGCTCGATGG
GCGACCGAGAGGGGGAGAAT

Downstream 100 bases:

>100_bases
CCGTGACCATCGTCGTCGAGTTCTTTCACGACGTTCTCTGAGCATGGTGTGCCGTGGCGTCGCCACGGTTGCGGCGAGTA
GCGGCGCGTCATCCTGAGGT

Product: DoxX subfamily

Products: NA

Alternate protein names: Terminal Quinol Oxidase Subunit; DoxX Subfamily

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MEWAFLAGRVIFGLFFVINGVNHFAMWRAMSGYAASKGVPAPQAAVIITGIMLLLGGASVATGYQPVIGNLLLIIFLVPV
AFWMHNFWAESDPMMRANQMAHFLKNLALAGAALALLGVPTPWPLSLGS

Sequences:

>Translated_129_residues
MEWAFLAGRVIFGLFFVINGVNHFAMWRAMSGYAASKGVPAPQAAVIITGIMLLLGGASVATGYQPVIGNLLLIIFLVPV
AFWMHNFWAESDPMMRANQMAHFLKNLALAGAALALLGVPTPWPLSLGS
>Mature_129_residues
MEWAFLAGRVIFGLFFVINGVNHFAMWRAMSGYAASKGVPAPQAAVIITGIMLLLGGASVATGYQPVIGNLLLIIFLVPV
AFWMHNFWAESDPMMRANQMAHFLKNLALAGAALALLGVPTPWPLSLGS

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13815; Mature: 13815

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWAFLAGRVIFGLFFVINGVNHFAMWRAMSGYAASKGVPAPQAAVIITGIMLLLGGASV
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
ATGYQPVIGNLLLIIFLVPVAFWMHNFWAESDPMMRANQMAHFLKNLALAGAALALLGVP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPWPLSLGS
CCCCCCCCC
>Mature Secondary Structure
MEWAFLAGRVIFGLFFVINGVNHFAMWRAMSGYAASKGVPAPQAAVIITGIMLLLGGASV
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
ATGYQPVIGNLLLIIFLVPVAFWMHNFWAESDPMMRANQMAHFLKNLALAGAALALLGVP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TPWPLSLGS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA