Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633331

Identifier: 221633331

GI number: 221633331

Start: 1343874

End: 1344359

Strand: Reverse

Name: 221633331

Synonym: trd_1351

Alternate gene names: NA

Gene position: 1344359-1343874 (Counterclockwise)

Preceding gene: 221633332

Following gene: 221633330

Centisome position: 67.12

GC content: 64.2

Gene sequence:

>486_bases
GTGCTTCGGGAGGAAGCGATGGCGCGAATCGTCATCACGATCGAGGGAGACTCGCAAGAGATTGGGGCGATTCAGGAAGT
TCTGCAACGACTCGCTGGACTGACGACAGGAGAGTTCGAGGTCAGTGAGGGTGTGCGACCACTCGGTGAGCGTGAACCGT
GGACGTTCGAAGAGTTCCGGCAGTTCTGGAGCCGCCTGCAGGACGGTGCGCGGCAGATCCTGGCGGAGATCGCCAAGCGC
CCTGAGGGGTACCCGATGGTGGATCTCGAGCGGGCGCTGGGGGTACCAGCCCGCGTTATCGGTGGGCGACTCAGTTCGGT
TGGCCACGCGATGCGGCGTTTCCCACACAAAGAGGAGCCGGTCGAGTTTCGGACGGGTGGCGACGATGCTCCAGGCCGGC
GGATCTACTTCATGAGGCCGGAGGTCGCACGCATGATCCGGCGACTGGTCAGTGAGGGGGCCAGCGCCGACGGTGCTGAG
TCCTGA

Upstream 100 bases:

>100_bases
GAACACTCAGGGAGAGTGATTCGGAAGAAAAAGGGTGGATAGGAGGGCTTGCGCGCAATGCAGAGTGAGAGTATGATTCC
TGTGTTGATAGTGTGAATCG

Downstream 100 bases:

>100_bases
AGAGATCGGCGCTCGAGAAAGGCGGGGAGGTGCGCACCAGCGTGCCTCCCCGTTTCGCGTCCGCAACGCCTGTTTCGGCC
GGCTCGCGATCCAGCGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFRQFWSRLQDGARQILAEIAKR
PEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEPVEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAE
S

Sequences:

>Translated_161_residues
MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFRQFWSRLQDGARQILAEIAKR
PEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEPVEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAE
S
>Mature_161_residues
MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFRQFWSRLQDGARQILAEIAKR
PEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEPVEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAE
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18095; Mature: 18095

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFR
CCCHHCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCHHHHH
QFWSRLQDGARQILAEIAKRPEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEP
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
VEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAES
CEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFR
CCCHHCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCHHHHH
QFWSRLQDGARQILAEIAKRPEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEP
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
VEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAES
CEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA