| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is folB [H]
Identifier: 221633306
GI number: 221633306
Start: 1317023
End: 1317394
Strand: Reverse
Name: folB [H]
Synonym: trd_1326
Alternate gene names: 221633306
Gene position: 1317394-1317023 (Counterclockwise)
Preceding gene: 221633307
Following gene: 221633305
Centisome position: 65.77
GC content: 64.25
Gene sequence:
>372_bases ATGAGCGATCGCCTTCTCCTCCGCGGCATGGAGTTCTATGCCTATCACGGCGTGCATCCCGAAGAGCGACGTCTCGGTCA GCGTTTCGTCGTCGATCTCGAAGTGGAGCTGGATCTCGTTCCGGCGGGGAGGAGCGATACGCTCGAGGCCACAGTGAACT ACGGCACGCTGTACCATACCGTCCGAGCGATCGTCGAGGGGGAGCCGCGTCAGCTCATCGAGGCGGTCGCTGAGGCGATC GCTCGGACGATTCTCGCGGACTATCCGCTCGTCCAGGCGGTGACGGTGCGGGTCTGGAAGCTGGCACCACCGATCGCGGG GGCGCATCTCGAGCGAGTCGGGGTCGAAATTCGTCGGGTACGGGATGCGTGA
Upstream 100 bases:
>100_bases ACAGCCGCTGGAACAGGCGGAGTCACGTCTCCTGACTGGTGAGGGTACACCGAGCCCCGCGTCCGAGGACTCCTCGGAGC GACCGAATGAGGAGCGCTGA
Downstream 100 bases:
>100_bases CGCGGATGCAGGAGGGAACACCGTGTCGAGTGCTGCAGTCGAGGTACCACGTGTGGACTCTCCACCTTTCGATCGTTGGC CATGGGGGCGCCGCACCTTC
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSDRLLLRGMEFYAYHGVHPEERRLGQRFVVDLEVELDLVPAGRSDTLEATVNYGTLYHTVRAIVEGEPRQLIEAVAEAI ARTILADYPLVQAVTVRVWKLAPPIAGAHLERVGVEIRRVRDA
Sequences:
>Translated_123_residues MSDRLLLRGMEFYAYHGVHPEERRLGQRFVVDLEVELDLVPAGRSDTLEATVNYGTLYHTVRAIVEGEPRQLIEAVAEAI ARTILADYPLVQAVTVRVWKLAPPIAGAHLERVGVEIRRVRDA >Mature_122_residues SDRLLLRGMEFYAYHGVHPEERRLGQRFVVDLEVELDLVPAGRSDTLEATVNYGTLYHTVRAIVEGEPRQLIEAVAEAIA RTILADYPLVQAVTVRVWKLAPPIAGAHLERVGVEIRRVRDA
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin [H]
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13843; Mature: 13712
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLLLRGMEFYAYHGVHPEERRLGQRFVVDLEVELDLVPAGRSDTLEATVNYGTLYHT CCCCHHHHHHHHEEECCCCHHHHHCCCEEEEEEEEEEEEECCCCCCCEEEEECHHHHHHH VRAIVEGEPRQLIEAVAEAIARTILADYPLVQAVTVRVWKLAPPIAGAHLERVGVEIRRV HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RDA CCC >Mature Secondary Structure SDRLLLRGMEFYAYHGVHPEERRLGQRFVVDLEVELDLVPAGRSDTLEATVNYGTLYHT CCCHHHHHHHHEEECCCCHHHHHCCCEEEEEEEEEEEEECCCCCCCEEEEECHHHHHHH VRAIVEGEPRQLIEAVAEAIARTILADYPLVQAVTVRVWKLAPPIAGAHLERVGVEIRRV HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RDA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2123867; 7584024; 9384377 [H]