Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633283

Identifier: 221633283

GI number: 221633283

Start: 1294854

End: 1295678

Strand: Reverse

Name: 221633283

Synonym: trd_1302

Alternate gene names: NA

Gene position: 1295678-1294854 (Counterclockwise)

Preceding gene: 221633284

Following gene: 221633281

Centisome position: 64.69

GC content: 64.48

Gene sequence:

>825_bases
ATGAGCGGAATGAGTACCGACGAGTTGGTCGCGCTCGCATTGGACATGGCGAACATGCGGCGCCTGCCCGCGGACAGCGA
GGTCTACGTGCCGGGTGCACGAATCCGCCGGCTTTTCGTCGCGCTCGATGTCGGGACAGCCGAGCTGCTCGTGGCCCGGG
ATATCGGTTGCGATGGCGTCTTGGCTCATCATCCAGCCGGCGGGCGGGCAGTTCTCCGCTTTCCCGAAGTGTTGACCCGC
CATGTCGAACTCATGGTCGAGCACGGTGTCGATCCAGCGGCTGCCAAGGCTGCGTTGCAACCCTTATTCGCGCGTGCGAT
TCTTCGTGCACAAGCGGCGAACTACGATCAGGTTCCCGCTGTGGCTCGCTTGTTTGGCATCCCCTTCCTGAACTTGCATT
TGCCTCTCGACGAGATCGGTCGTCGGGTAATGGTCGAAACGATCGAGCGCTACCGGACGACGCTTGGCCGCGAGTCGACG
GTACAGGATGTGATCGATGCGCTGCGGACGCTGCCCGAGTTCGGCGAGAGTGCGGTGCCGATCATGGTTCCGGTGGGGGC
GGTCGATCGGCCGGCGCGTCGCGTCGCGGTCGTGCATGGGGCAGGGACCAACGGCGGTGCATCCGTCGCGCAAGCCTATT
TCGCGCACGGCGTGGATACGGTCGTGTATCTCCATTTGGCCCCGGAGGAGGTCGAGCGACTCCGCAGCGGCGCCTCCGGT
TCGGTCATCGTCGTCGGTCATGTCCCCGGTGACCAGGTCGGCCTCAACCGATACCTGGCTGAAGTCGAGCGACGGGGCGT
CGAGATCGTTCGCGCCGGCATTTAG

Upstream 100 bases:

>100_bases
ATGTCGCCAGCGCGAGTTTCCTCTGCGGCTCGACGACCAGCGGTGCCGGTCGCCGACAGCGGGCCTGTGCGACAATCGCG
GGGAAGGAGGGCGAGAAGCG

Downstream 100 bases:

>100_bases
CGACCGAACACGTTGGCGATGCGGTCGAGCGCCCGCTCCAGGAGCTCGTCAGCGGTCGCGAAACTCAGGCGAATACAACC
GGAGCCGGAGGCACCGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSGMSTDELVALALDMANMRRLPADSEVYVPGARIRRLFVALDVGTAELLVARDIGCDGVLAHHPAGGRAVLRFPEVLTR
HVELMVEHGVDPAAAKAALQPLFARAILRAQAANYDQVPAVARLFGIPFLNLHLPLDEIGRRVMVETIERYRTTLGREST
VQDVIDALRTLPEFGESAVPIMVPVGAVDRPARRVAVVHGAGTNGGASVAQAYFAHGVDTVVYLHLAPEEVERLRSGASG
SVIVVGHVPGDQVGLNRYLAEVERRGVEIVRAGI

Sequences:

>Translated_274_residues
MSGMSTDELVALALDMANMRRLPADSEVYVPGARIRRLFVALDVGTAELLVARDIGCDGVLAHHPAGGRAVLRFPEVLTR
HVELMVEHGVDPAAAKAALQPLFARAILRAQAANYDQVPAVARLFGIPFLNLHLPLDEIGRRVMVETIERYRTTLGREST
VQDVIDALRTLPEFGESAVPIMVPVGAVDRPARRVAVVHGAGTNGGASVAQAYFAHGVDTVVYLHLAPEEVERLRSGASG
SVIVVGHVPGDQVGLNRYLAEVERRGVEIVRAGI
>Mature_273_residues
SGMSTDELVALALDMANMRRLPADSEVYVPGARIRRLFVALDVGTAELLVARDIGCDGVLAHHPAGGRAVLRFPEVLTRH
VELMVEHGVDPAAAKAALQPLFARAILRAQAANYDQVPAVARLFGIPFLNLHLPLDEIGRRVMVETIERYRTTLGRESTV
QDVIDALRTLPEFGESAVPIMVPVGAVDRPARRVAVVHGAGTNGGASVAQAYFAHGVDTVVYLHLAPEEVERLRSGASGS
VIVVGHVPGDQVGLNRYLAEVERRGVEIVRAGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29391; Mature: 29260

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMSTDELVALALDMANMRRLPADSEVYVPGARIRRLFVALDVGTAELLVARDIGCDGV
CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHEEECCHHHEEEEECCCCCCE
LAHHPAGGRAVLRFPEVLTRHVELMVEHGVDPAAAKAALQPLFARAILRAQAANYDQVPA
EEECCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VARLFGIPFLNLHLPLDEIGRRVMVETIERYRTTLGRESTVQDVIDALRTLPEFGESAVP
HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
IMVPVGAVDRPARRVAVVHGAGTNGGASVAQAYFAHGVDTVVYLHLAPEEVERLRSGASG
EEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCC
SVIVVGHVPGDQVGLNRYLAEVERRGVEIVRAGI
CEEEEECCCCCHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure 
SGMSTDELVALALDMANMRRLPADSEVYVPGARIRRLFVALDVGTAELLVARDIGCDGV
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHEEECCHHHEEEEECCCCCCE
LAHHPAGGRAVLRFPEVLTRHVELMVEHGVDPAAAKAALQPLFARAILRAQAANYDQVPA
EEECCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VARLFGIPFLNLHLPLDEIGRRVMVETIERYRTTLGRESTVQDVIDALRTLPEFGESAVP
HHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
IMVPVGAVDRPARRVAVVHGAGTNGGASVAQAYFAHGVDTVVYLHLAPEEVERLRSGASG
EEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCC
SVIVVGHVPGDQVGLNRYLAEVERRGVEIVRAGI
CEEEEECCCCCHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA