| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is ubiG [H]
Identifier: 221633275
GI number: 221633275
Start: 1285796
End: 1286653
Strand: Reverse
Name: ubiG [H]
Synonym: trd_1295
Alternate gene names: 221633275
Gene position: 1286653-1285796 (Counterclockwise)
Preceding gene: 221633276
Following gene: 221633274
Centisome position: 64.24
GC content: 63.52
Gene sequence:
>858_bases GTGGTCGTCGAGCGGTCGTCTCGTAACTGCGTCTTGTGCGGCACGCGCTTCACCGGAAGGCGGTTTCTCTGCCGCCGGTG TAGCGAGCGTTATCGGCGAGAACGACCGAGTCGCGAGCTCCGGCGCCGATTTTACGAGGCGGTCGACCAACTGTACCCGA GTTGGGCGAACACCTTCGGCTCGTACAACATGCCGCAAGCGCTCTTGGCGGTACTCGATTCGGTACCTCGCTCCGCGCGT ATCCTGGAACTCGGGTGCGGTGGTGGTGCACTTTTGCGGACACTGGCTGAGCGCGGCTTCGAACGGCTCGTCGGGCTCGA TTTGGCCCGGACTGCGCTGCGGGAGGCATGCCGGCGAGAAACACCGGCCGCGTTCGTTTTGGCGGATGCCGAACGCTTAC CCTTCCGCTCGCAGAGTTTCGACGTCGTGATCGCGACCGACCTGATCGAGCATGTCGATGATCTGGATGCACATCTGGCC GAAGTCGCGCGTGTCCTTCGGCCCGGAGGCTGGTACTTGGTGAAAACGCCGAACCGCCCCCTCGCCGAGTTGTACTACCG ACTCGCTGGGTTGGACGATTATCCGTTCTGGCATCCTTCGATGCTGTCGCCTGGTGAGCTGCAGACACGATTCGCCCGAC ATGGCTTTACGGTACGGATTCTGGCACAGCCAGCTCTGACACCCGCGCAGCTGCGCAAGGTGCCGACGCCGCTCTTGCGG GGCATCGCAGCCCGGCTGCCAGTCGCGCTTCTGCCTGTGTGGCTGCGGCCCCATCTGGAAGCGCTCGCTGAGCTGCAGGC GGAACCGGACAGTAGCGGCGATGGTGATAGTCGACGTACACTGAAGGAACCATCCTGA
Upstream 100 bases:
>100_bases CGGTCAACTCGCGCGATCTTCAGCGATCCTGTACTCGGCATCGGGTACATGTTCGTGACGAGTGGTGCGCTCGGTCTCCT GGCTTGGAGCTGGAGGAAGC
Downstream 100 bases:
>100_bases GGAACGCAGGCGGTGGCGCTGATGCGTGGTGGTTCACTTCTTTTGCTGCTGGTCATGCTCGTCGGTGCGTCCTGTGTGGC AACGAGTCCACTCGGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MVVERSSRNCVLCGTRFTGRRFLCRRCSERYRRERPSRELRRRFYEAVDQLYPSWANTFGSYNMPQALLAVLDSVPRSAR ILELGCGGGALLRTLAERGFERLVGLDLARTALREACRRETPAAFVLADAERLPFRSQSFDVVIATDLIEHVDDLDAHLA EVARVLRPGGWYLVKTPNRPLAELYYRLAGLDDYPFWHPSMLSPGELQTRFARHGFTVRILAQPALTPAQLRKVPTPLLR GIAARLPVALLPVWLRPHLEALAELQAEPDSSGDGDSRRTLKEPS
Sequences:
>Translated_285_residues MVVERSSRNCVLCGTRFTGRRFLCRRCSERYRRERPSRELRRRFYEAVDQLYPSWANTFGSYNMPQALLAVLDSVPRSAR ILELGCGGGALLRTLAERGFERLVGLDLARTALREACRRETPAAFVLADAERLPFRSQSFDVVIATDLIEHVDDLDAHLA EVARVLRPGGWYLVKTPNRPLAELYYRLAGLDDYPFWHPSMLSPGELQTRFARHGFTVRILAQPALTPAQLRKVPTPLLR GIAARLPVALLPVWLRPHLEALAELQAEPDSSGDGDSRRTLKEPS >Mature_285_residues MVVERSSRNCVLCGTRFTGRRFLCRRCSERYRRERPSRELRRRFYEAVDQLYPSWANTFGSYNMPQALLAVLDSVPRSAR ILELGCGGGALLRTLAERGFERLVGLDLARTALREACRRETPAAFVLADAERLPFRSQSFDVVIATDLIEHVDDLDAHLA EVARVLRPGGWYLVKTPNRPLAELYYRLAGLDDYPFWHPSMLSPGELQTRFARHGFTVRILAQPALTPAQLRKVPTPLLR GIAARLPVALLPVWLRPHLEALAELQAEPDSSGDGDSRRTLKEPS
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 32232; Mature: 32232
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVERSSRNCVLCGTRFTGRRFLCRRCSERYRRERPSRELRRRFYEAVDQLYPSWANTFG CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC SYNMPQALLAVLDSVPRSARILELGCGGGALLRTLAERGFERLVGLDLARTALREACRRE CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPAAFVLADAERLPFRSQSFDVVIATDLIEHVDDLDAHLAEVARVLRPGGWYLVKTPNRP CCCEEEEECHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC LAELYYRLAGLDDYPFWHPSMLSPGELQTRFARHGFTVRILAQPALTPAQLRKVPTPLLR HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCHHHHH GIAARLPVALLPVWLRPHLEALAELQAEPDSSGDGDSRRTLKEPS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVVERSSRNCVLCGTRFTGRRFLCRRCSERYRRERPSRELRRRFYEAVDQLYPSWANTFG CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC SYNMPQALLAVLDSVPRSARILELGCGGGALLRTLAERGFERLVGLDLARTALREACRRE CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPAAFVLADAERLPFRSQSFDVVIATDLIEHVDDLDAHLAEVARVLRPGGWYLVKTPNRP CCCEEEEECHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC LAELYYRLAGLDDYPFWHPSMLSPGELQTRFARHGFTVRILAQPALTPAQLRKVPTPLLR HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCHHHHH GIAARLPVALLPVWLRPHLEALAELQAEPDSSGDGDSRRTLKEPS HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]