Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is recX [H]

Identifier: 221633221

GI number: 221633221

Start: 1223124

End: 1223792

Strand: Reverse

Name: recX [H]

Synonym: trd_1238

Alternate gene names: 221633221

Gene position: 1223792-1223124 (Counterclockwise)

Preceding gene: 221633223

Following gene: 221633220

Centisome position: 61.1

GC content: 63.53

Gene sequence:

>669_bases
ATGAGCGAGGAAACGGACGCGATAACCCGGATCGTACCGGACCGTCGCCGACCCGATCGGCTACTCATCGAGCGGAACGG
TTTGCCGTGGCTGCGGCTCAGTGCCCTACGGATCAGCGAACTCGATGTGCGGACCGGTGAAGTTCTCACGCCGGAGCGAC
GAGCGCGCTTGGAGCATGCGGCAGCTGTCGAGGAAGCGATAGAGGCTGCACTGCGATTGCTCGCAGCGCGTCCGCGGAGT
GAGGCGGAACTTGCCCGCCGACTGCGACAGAAAGGCTTCAGGGACGCCGTCGTCCAAGAAGTGATGACCAAACTCCGAGC
GCTCGGCTACGTGGACGATCGTGCCTTCGTCGCGTTCTGGGTCGCGCAGCGACGCACGAGTCGTCCGCGAGGCATCGCAG
CTCTGCGTCAGGAACTGCGCGCCAAAGGAATCACCGACGAGCTGATCGAAGCGGCCGTGACACACGATGCGGAGGAAGAA
TTCAGCGCGGCGCTGGCGCTGGCCCAGAAGCACCTTGGGCGTTTGCAGCAACATGACCGGGTGACTCAGGAGCGCCGCGT
CATCGGCTTGCTGCAGCGCCGCGGATTTTCCTGGTCCGTTATCCGGCGCGTGGTGCGGGAAGTGTTTTCCGGAAAAGCTG
GAGACGACGATTTTCCGCTGGCTGATTGA

Upstream 100 bases:

>100_bases
CCAATCATGGACCGGCGCGAGACGCTCGTCGAGGTACACATCCGATACATTCTCCCGTTCCTAACTGTGCCAGATGACTC
GTTGCCGAGTGGAGGACCGG

Downstream 100 bases:

>100_bases
CCAGGGAGCAGATTCACGCAGAGGACCCTCACCCCCGTTCGATTGCGCATGCAGCGCTCCAGGCGAAGCCTTCGTGTGCG
GGGCCGTTTCCTCCAATCTT

Product: regulatory protein recX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHAAAVEEAIEAALRLLAARPRS
EAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFWVAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEE
FSAALALAQKHLGRLQQHDRVTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD

Sequences:

>Translated_222_residues
MSEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHAAAVEEAIEAALRLLAARPRS
EAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFWVAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEE
FSAALALAQKHLGRLQQHDRVTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD
>Mature_221_residues
SEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHAAAVEEAIEAALRLLAARPRSE
AELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFWVAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEEF
SAALALAQKHLGRLQQHDRVTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 25327; Mature: 25196

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHA
CCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
AAVEEAIEAALRLLAARPRSEAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFW
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEEFSAALALAQKHLGRLQQHDR
HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SEETDAITRIVPDRRRPDRLLIERNGLPWLRLSALRISELDVRTGEVLTPERRARLEHA
CCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
AAVEEAIEAALRLLAARPRSEAELARRLRQKGFRDAVVQEVMTKLRALGYVDDRAFVAFW
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VAQRRTSRPRGIAALRQELRAKGITDELIEAAVTHDAEEEFSAALALAQKHLGRLQQHDR
HHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VTQERRVIGLLQRRGFSWSVIRRVVREVFSGKAGDDDFPLAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA