| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is pyrG
Identifier: 221633219
GI number: 221633219
Start: 1220511
End: 1222166
Strand: Reverse
Name: pyrG
Synonym: trd_1236
Alternate gene names: 221633219
Gene position: 1222166-1220511 (Counterclockwise)
Preceding gene: 221633220
Following gene: 221633218
Centisome position: 61.02
GC content: 62.38
Gene sequence:
>1656_bases ATGCCGAAGTACGTCTTCGTGACGGGGGGTGTTGTCTCATCGGTCGGGAAGGGGATCACCACCGCTGCGATCGGGAGACT GCTCAAGAGCCGCGGCTTGCGGGTGGCATTGATGAAACTGGATCCCTACTTGAACGTGGATCCGGGCACGATGTCGCCGT ACCAGCACGGCGAAGTCTTCGTCACCGAAGATGGCGCGGAGACCGATCTCGATCTTGGCCATTATGAGCGGTTCACGGAC GAGAATTTGAGTCGGGCATCCAACGTCACGACCGGTCAAGTCTACTCGGCCGTGATCGCGAAGGAACGCCGTGGAGATTA TCTCGGTGGCACCGTTCAGGTGATCCCGCACATCACCAACGAGATCAAGGCACGCATCCGCCAGGTGGCGGAGCTTCACC GACCGGATGTCATCGTGGTGGAGGTCGGTGGCACAGTTGGTGATATCGAAGGGCAGCCATTCCTGGAGGCGATTCGCCAG ATGCGGCGCGAGGAAGGCCGCCGCAACGTGCTGTATATCCATGTCACGTTCTTGCCGTACATCGCTAGCACCGGCGAAGT GAAGACCAAGCCGACCCAACACAGCGTCAAGGAATTGCGCGCGATCGGGATCCAACCGGACGTGATCATCTGTCGGACCG ATCATCCGGTCGGTGATGACGTGCGGGCGAAGGTCGCGCTCTTCGGCGATGTGGACGAGGATGCCGTCATCTTGTTGCCG ACGGCCGAGACGATTTACGAAGTTCCCTTGATGCTGGAGCGCGCGGGGCTGGGCCGATACGTCATGGAGCATCTCGGCTG GGACGATCGCGATCCCGATTTGGCCGACTGGGAGCGGATGGTGGAACGGTTGAAGTCGCCGCGCCGGCGTCTCCGCATCG CGCTGGTCGGGAAGTACGTCGAGTTGCACGATGCCTACTTGAGCGTGGTCGAAGCCTTGCGCCATGCAGGACTGGCGCAT GATGTCGCCGTGGAGATCGTCTGGGTCAATTCGACGGCCGAACGAAGCGAGATCGAGGCGGCGCTGCGCCATGTGAACGG AATCGTGGTGCCGGGAGGGTTCGGCCCGCGCGGCGTCGAAGGGAAGATGCTGGCGGCTCGCTACGCGAGGGAGCGCGGGA TTCCTTACCTCGGTCTCTGCTACGGCCTGCACATGGCAGTGATCGAGTTCGCGCGAAACGTCCTCGGACTGTGCGGGGCG AACAGCACGGAAATCGATCCGGAAACGCCCCACCCGGTCATCGACCTCATGCCCGACCAGCGGGGGGTCGAAATGGGGGG TACGATGCGTTTGGGACGATATCCGTGCCAGCTCGTACCGGGGACCAAGGCAGCGCTCGCGTACGGGGAATCGCTGGTCT ACGAGCGACACCGCCATCGCTGGGAAGTGAACAATGCCTATCGAGAGGCGTTCGAGGCTGCTGGTTTTGTCGTGAGCGGA CAATCTCCTGACGGCCGGTACGTCGAGATCATGGAGCTGCACGATCACCCGTGGTTCGTCGGGGTGCAGTTCCATCCCGA GTTCAAGTCGCGACCGAACCGGCCGCACCCGCTCTTCGTGGCGTTCATCGGTGTGGCCAAGCATGTGTTGCGAGAGGGCG AGCAGCGACCGCTGCCACTGGCTGAGCCGGTCGCGATGCCTGCTGCCGATGACTGA
Upstream 100 bases:
>100_bases AGCTTGAGCGTGCGCAAGGGCGAGTTCGGGGAGGCGGTGGAAGTGGTGGTGCTCGTCCCCGATCCCTGACGGTGGAGAGC GCTGCGCGGGAGGTGTGCTG
Downstream 100 bases:
>100_bases TCCGTGTTGCTGGTGCCGCTGGGTTTGTGATAGGATGCGCAAGCGTGAGCGGGCCGCAGAGTCGCCCGCCGCGAGTACGA GATTGGCAAGCGATCGGGAC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MPKYVFVTGGVVSSVGKGITTAAIGRLLKSRGLRVALMKLDPYLNVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFTD ENLSRASNVTTGQVYSAVIAKERRGDYLGGTVQVIPHITNEIKARIRQVAELHRPDVIVVEVGGTVGDIEGQPFLEAIRQ MRREEGRRNVLYIHVTFLPYIASTGEVKTKPTQHSVKELRAIGIQPDVIICRTDHPVGDDVRAKVALFGDVDEDAVILLP TAETIYEVPLMLERAGLGRYVMEHLGWDDRDPDLADWERMVERLKSPRRRLRIALVGKYVELHDAYLSVVEALRHAGLAH DVAVEIVWVNSTAERSEIEAALRHVNGIVVPGGFGPRGVEGKMLAARYARERGIPYLGLCYGLHMAVIEFARNVLGLCGA NSTEIDPETPHPVIDLMPDQRGVEMGGTMRLGRYPCQLVPGTKAALAYGESLVYERHRHRWEVNNAYREAFEAAGFVVSG QSPDGRYVEIMELHDHPWFVGVQFHPEFKSRPNRPHPLFVAFIGVAKHVLREGEQRPLPLAEPVAMPAADD
Sequences:
>Translated_551_residues MPKYVFVTGGVVSSVGKGITTAAIGRLLKSRGLRVALMKLDPYLNVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFTD ENLSRASNVTTGQVYSAVIAKERRGDYLGGTVQVIPHITNEIKARIRQVAELHRPDVIVVEVGGTVGDIEGQPFLEAIRQ MRREEGRRNVLYIHVTFLPYIASTGEVKTKPTQHSVKELRAIGIQPDVIICRTDHPVGDDVRAKVALFGDVDEDAVILLP TAETIYEVPLMLERAGLGRYVMEHLGWDDRDPDLADWERMVERLKSPRRRLRIALVGKYVELHDAYLSVVEALRHAGLAH DVAVEIVWVNSTAERSEIEAALRHVNGIVVPGGFGPRGVEGKMLAARYARERGIPYLGLCYGLHMAVIEFARNVLGLCGA NSTEIDPETPHPVIDLMPDQRGVEMGGTMRLGRYPCQLVPGTKAALAYGESLVYERHRHRWEVNNAYREAFEAAGFVVSG QSPDGRYVEIMELHDHPWFVGVQFHPEFKSRPNRPHPLFVAFIGVAKHVLREGEQRPLPLAEPVAMPAADD >Mature_550_residues PKYVFVTGGVVSSVGKGITTAAIGRLLKSRGLRVALMKLDPYLNVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFTDE NLSRASNVTTGQVYSAVIAKERRGDYLGGTVQVIPHITNEIKARIRQVAELHRPDVIVVEVGGTVGDIEGQPFLEAIRQM RREEGRRNVLYIHVTFLPYIASTGEVKTKPTQHSVKELRAIGIQPDVIICRTDHPVGDDVRAKVALFGDVDEDAVILLPT AETIYEVPLMLERAGLGRYVMEHLGWDDRDPDLADWERMVERLKSPRRRLRIALVGKYVELHDAYLSVVEALRHAGLAHD VAVEIVWVNSTAERSEIEAALRHVNGIVVPGGFGPRGVEGKMLAARYARERGIPYLGLCYGLHMAVIEFARNVLGLCGAN STEIDPETPHPVIDLMPDQRGVEMGGTMRLGRYPCQLVPGTKAALAYGESLVYERHRHRWEVNNAYREAFEAAGFVVSGQ SPDGRYVEIMELHDHPWFVGVQFHPEFKSRPNRPHPLFVAFIGVAKHVLREGEQRPLPLAEPVAMPAADD
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=559, Percent_Identity=46.3327370304114, Blast_Score=497, Evalue=1e-140, Organism=Homo sapiens, GI28559085, Length=571, Percent_Identity=44.30823117338, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI28559083, Length=571, Percent_Identity=44.30823117338, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI221316689, Length=571, Percent_Identity=44.30823117338, Blast_Score=488, Evalue=1e-138, Organism=Escherichia coli, GI1789142, Length=536, Percent_Identity=53.1716417910448, Blast_Score=566, Evalue=1e-162, Organism=Caenorhabditis elegans, GI25148299, Length=608, Percent_Identity=39.6381578947368, Blast_Score=418, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322563, Length=557, Percent_Identity=44.524236983842, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6319432, Length=563, Percent_Identity=41.0301953818828, Blast_Score=440, Evalue=1e-124, Organism=Drosophila melanogaster, GI24664469, Length=571, Percent_Identity=45.7092819614711, Blast_Score=490, Evalue=1e-139, Organism=Drosophila melanogaster, GI21357815, Length=517, Percent_Identity=44.294003868472, Blast_Score=416, Evalue=1e-116,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_THERP (B9L1H7)
Other databases:
- EMBL: CP001275 - RefSeq: YP_002522444.1 - ProteinModelPortal: B9L1H7 - GeneID: 7354584 - GenomeReviews: CP001275_GR - KEGG: tro:trd_1236 - OMA: RVTMQKL - ProtClustDB: PRK05380 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 61249; Mature: 61118
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 380-380 ACT_SITE 505-505 ACT_SITE 507-507
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYVFVTGGVVSSVGKGITTAAIGRLLKSRGLRVALMKLDPYLNVDPGTMSPYQHGEVF CCCEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFTDENLSRASNVTTGQVYSAVIAKERRGDYLGGTVQVIPHITN EECCCCCCCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHH EIKARIRQVAELHRPDVIVVEVGGTVGDIEGQPFLEAIRQMRREEGRRNVLYIHVTFLPY HHHHHHHHHHHHCCCCEEEEEECCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHH IASTGEVKTKPTQHSVKELRAIGIQPDVIICRTDHPVGDDVRAKVALFGDVDEDAVILLP HCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEE TAETIYEVPLMLERAGLGRYVMEHLGWDDRDPDLADWERMVERLKSPRRRLRIALVGKYV CHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHEEEHHHHHHH ELHDAYLSVVEALRHAGLAHDVAVEIVWVNSTAERSEIEAALRHVNGIVVPGGFGPRGVE HHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCCCCC GKMLAARYARERGIPYLGLCYGLHMAVIEFARNVLGLCGANSTEIDPETPHPVIDLMPDQ CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC RGVEMGGTMRLGRYPCQLVPGTKAALAYGESLVYERHRHRWEVNNAYREAFEAAGFVVSG CCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEC QSPDGRYVEIMELHDHPWFVGVQFHPEFKSRPNRPHPLFVAFIGVAKHVLREGEQRPLPL CCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCC AEPVAMPAADD CCCCCCCCCCC >Mature Secondary Structure PKYVFVTGGVVSSVGKGITTAAIGRLLKSRGLRVALMKLDPYLNVDPGTMSPYQHGEVF CCEEEEECHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFTDENLSRASNVTTGQVYSAVIAKERRGDYLGGTVQVIPHITN EECCCCCCCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHH EIKARIRQVAELHRPDVIVVEVGGTVGDIEGQPFLEAIRQMRREEGRRNVLYIHVTFLPY HHHHHHHHHHHHCCCCEEEEEECCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEHH IASTGEVKTKPTQHSVKELRAIGIQPDVIICRTDHPVGDDVRAKVALFGDVDEDAVILLP HCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEE TAETIYEVPLMLERAGLGRYVMEHLGWDDRDPDLADWERMVERLKSPRRRLRIALVGKYV CHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHEEEHHHHHHH ELHDAYLSVVEALRHAGLAHDVAVEIVWVNSTAERSEIEAALRHVNGIVVPGGFGPRGVE HHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCCCCC GKMLAARYARERGIPYLGLCYGLHMAVIEFARNVLGLCGANSTEIDPETPHPVIDLMPDQ CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCC RGVEMGGTMRLGRYPCQLVPGTKAALAYGESLVYERHRHRWEVNNAYREAFEAAGFVVSG CCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEC QSPDGRYVEIMELHDHPWFVGVQFHPEFKSRPNRPHPLFVAFIGVAKHVLREGEQRPLPL CCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCC AEPVAMPAADD CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA