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The map label for this gene is 221633166

Identifier: 221633166

GI number: 221633166

Start: 1171104

End: 1172216

Strand: Reverse

Name: 221633166

Synonym: trd_1182

Alternate gene names: NA

Gene position: 1172216-1171104 (Counterclockwise)

Preceding gene: 221633167

Following gene: 221633160

Centisome position: 58.52

GC content: 64.42

Gene sequence:

>1113_bases
GTGAACAGTCCGTCGTATCGAACGCTCCTGGATACCCCATGCCTGGTCGTCGATCTCGATCGTTTGGAGCGCAATCTCGC
CGAGATGGCCGAGTATGCTCGCACCCACGGGCTCGCTTTGCGTCCCCACTTGAAAACGCACAAGACGGCTGAAATCGCTC
GCATGCAGCAGGCGCACGGAGTGGTCGGCTTCACCTGTGCCAAGGTCGGCGAGGCAGAGGCGTTCGCTGCCGCTGGTGTG
CTGGATGATGTCCTGATCGCTTATCAGATCGTGGGAGATCGAAAGATCGAACGTCTCCTGCGCTTGGCCGAACGGGTGCG
GGTCACAGTGGCGGTGGATAGCGTCGCGGTCGCCGAGCCTCTCAGCCGGGCAGCTCTCGCCCGCGGAGAGCAGCTCGATG
TCGTCATCGAGGTCGATACTGGCCTTCGCCGGGCAGGTGTCGAGCCGGGTGAGCCGGTGCTCCGGTTGGCACGCGAAATC
ATCGAGATGCCCGGACTCCGCTTGCGGGGCCTGATGACGCACGAGGGTCATGCTGGTCGAGCGAGCACCACGGAAGAGCT
CGAGGGCCTGGCACGTATGGCGGGCGAGGCGATGGTCGCGTCAGCCGAGCTTCTTCGGCGGGAGGGGATCCCGGTCGATG
TCGTGAGCGTGGGGTCGACGCCGGCGGCGTTCGCGACCACGCGCGTGCCTGGTATCACTGAGATGCGCCCTGGTACGTAT
GTTTTCTACGATGCGGCAGCGTTTCGCTTCGGCCGTATCGGTCCGGATCGAGTCGCCTTGCGTGTCCTGGCCACGGTGAT
CAGCCGTCCGGCTCCCGATCGGGCGGTGATCGACGCAGGGAGCAAGACACTCACCTACGATCCACCCCCACCGGGGCGGA
CCGGCTACGGATACGTTGTGGAGTATCCGGATGCGGTGATCAGCCGGCTGAGCGAGGAGCACGGGGTGATCGAGTTCCCG
CCCGGGACGAAGGGACCACAGGTCGGCGAACGCATCGAGATCATTCCCAATCACGTCTGTCCAGTGGTCAACCTGCAAGA
CGAACTCTTCGTCGTTCGGGGAGGAGAGTTCGTCGGCACCTGGCGTGTCATCGCGCGTGGCTGTGTCCGCTGA

Upstream 100 bases:

>100_bases
CCGTCTCTATCCGGAGGCTGTGCGGCTGTATGCTGCTGGTCGGTTGCGGGTGGAAGGTCGACGAGTGCGTATTCTTTCTT
CTCCATGAGGAGGGACGACT

Downstream 100 bases:

>100_bases
TGCCATCAACCGGGGGGTGGCAGAACATGGTCGCGCCCGCGCAGTTCGCGCAAGCACTCGCGACAGACGAGCACGAACTC
GACATCGGTCATACCGATCT

Product: Alanine racemase, N-terminal domain family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MNSPSYRTLLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHGVVGFTCAKVGEAEAFAAAGV
LDDVLIAYQIVGDRKIERLLRLAERVRVTVAVDSVAVAEPLSRAALARGEQLDVVIEVDTGLRRAGVEPGEPVLRLAREI
IEMPGLRLRGLMTHEGHAGRASTTEELEGLARMAGEAMVASAELLRREGIPVDVVSVGSTPAAFATTRVPGITEMRPGTY
VFYDAAAFRFGRIGPDRVALRVLATVISRPAPDRAVIDAGSKTLTYDPPPPGRTGYGYVVEYPDAVISRLSEEHGVIEFP
PGTKGPQVGERIEIIPNHVCPVVNLQDELFVVRGGEFVGTWRVIARGCVR

Sequences:

>Translated_370_residues
MNSPSYRTLLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHGVVGFTCAKVGEAEAFAAAGV
LDDVLIAYQIVGDRKIERLLRLAERVRVTVAVDSVAVAEPLSRAALARGEQLDVVIEVDTGLRRAGVEPGEPVLRLAREI
IEMPGLRLRGLMTHEGHAGRASTTEELEGLARMAGEAMVASAELLRREGIPVDVVSVGSTPAAFATTRVPGITEMRPGTY
VFYDAAAFRFGRIGPDRVALRVLATVISRPAPDRAVIDAGSKTLTYDPPPPGRTGYGYVVEYPDAVISRLSEEHGVIEFP
PGTKGPQVGERIEIIPNHVCPVVNLQDELFVVRGGEFVGTWRVIARGCVR
>Mature_370_residues
MNSPSYRTLLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHGVVGFTCAKVGEAEAFAAAGV
LDDVLIAYQIVGDRKIERLLRLAERVRVTVAVDSVAVAEPLSRAALARGEQLDVVIEVDTGLRRAGVEPGEPVLRLAREI
IEMPGLRLRGLMTHEGHAGRASTTEELEGLARMAGEAMVASAELLRREGIPVDVVSVGSTPAAFATTRVPGITEMRPGTY
VFYDAAAFRFGRIGPDRVALRVLATVISRPAPDRAVIDAGSKTLTYDPPPPGRTGYGYVVEYPDAVISRLSEEHGVIEFP
PGTKGPQVGERIEIIPNHVCPVVNLQDELFVVRGGEFVGTWRVIARGCVR

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 40076; Mature: 40076

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPSYRTLLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHG
CCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCC
VVGFTCAKVGEAEAFAAAGVLDDVLIAYQIVGDRKIERLLRLAERVRVTVAVDSVAVAEP
CEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCHHHHHH
LSRAALARGEQLDVVIEVDTGLRRAGVEPGEPVLRLAREIIEMPGLRLRGLMTHEGHAGR
HHHHHHHCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
ASTTEELEGLARMAGEAMVASAELLRREGIPVDVVSVGSTPAAFATTRVPGITEMRPGTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCEE
VFYDAAAFRFGRIGPDRVALRVLATVISRPAPDRAVIDAGSKTLTYDPPPPGRTGYGYVV
EEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCEEE
EYPDAVISRLSEEHGVIEFPPGTKGPQVGERIEIIPNHVCPVVNLQDELFVVRGGEFVGT
ECHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCCCCCEEECCCCEEEEECCCEEHH
WRVIARGCVR
HHHHHHHHCC
>Mature Secondary Structure
MNSPSYRTLLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHG
CCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCC
VVGFTCAKVGEAEAFAAAGVLDDVLIAYQIVGDRKIERLLRLAERVRVTVAVDSVAVAEP
CEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCHHHHHH
LSRAALARGEQLDVVIEVDTGLRRAGVEPGEPVLRLAREIIEMPGLRLRGLMTHEGHAGR
HHHHHHHCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
ASTTEELEGLARMAGEAMVASAELLRREGIPVDVVSVGSTPAAFATTRVPGITEMRPGTY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCEE
VFYDAAAFRFGRIGPDRVALRVLATVISRPAPDRAVIDAGSKTLTYDPPPPGRTGYGYVV
EEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCEEE
EYPDAVISRLSEEHGVIEFPPGTKGPQVGERIEIIPNHVCPVVNLQDELFVVRGGEFVGT
ECHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCCCCCEEECCCCEEEEECCCEEHH
WRVIARGCVR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]