Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632896

Identifier: 221632896

GI number: 221632896

Start: 877315

End: 877461

Strand: Reverse

Name: 221632896

Synonym: trd_0896

Alternate gene names: NA

Gene position: 877461-877315 (Counterclockwise)

Preceding gene: 221632907

Following gene: 221632893

Centisome position: 43.81

GC content: 63.95

Gene sequence:

>147_bases
GTGCAGGCCACCGGGCCCGATCCGCCCTCGCAACTAAGTATCGTCGCCGATGCTGAACACGACAAGTTGCCCCTCCCCAG
CCTCGTACGCGTTCTCTTCCGCTACGAGCGACCGGAACGCGAGCCTCTGTCAGTTCCGTCACCGTAG

Upstream 100 bases:

>100_bases
GTCCGTGTCCCTGGCTGACCCCCGGGTGACGCTGGCGAGGGCGCATGGGAGTCGAACCCACCGGCGAGGCTCGTCACCCC
GCCCACCGGTTTTGAAGACC

Downstream 100 bases:

>100_bases
CAGGGTTTCCGAGCGATGAACGGTTCATCCTGAAGCGCGTCACCGGACTCGCTGTCTCACCATCATCTCCAACCCGGAAC
GACCAAGCGATTTCAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP

Sequences:

>Translated_48_residues
MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP
>Mature_48_residues
MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5337; Mature: 5337

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP
CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA