| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632896
Identifier: 221632896
GI number: 221632896
Start: 877315
End: 877461
Strand: Reverse
Name: 221632896
Synonym: trd_0896
Alternate gene names: NA
Gene position: 877461-877315 (Counterclockwise)
Preceding gene: 221632907
Following gene: 221632893
Centisome position: 43.81
GC content: 63.95
Gene sequence:
>147_bases GTGCAGGCCACCGGGCCCGATCCGCCCTCGCAACTAAGTATCGTCGCCGATGCTGAACACGACAAGTTGCCCCTCCCCAG CCTCGTACGCGTTCTCTTCCGCTACGAGCGACCGGAACGCGAGCCTCTGTCAGTTCCGTCACCGTAG
Upstream 100 bases:
>100_bases GTCCGTGTCCCTGGCTGACCCCCGGGTGACGCTGGCGAGGGCGCATGGGAGTCGAACCCACCGGCGAGGCTCGTCACCCC GCCCACCGGTTTTGAAGACC
Downstream 100 bases:
>100_bases CAGGGTTTCCGAGCGATGAACGGTTCATCCTGAAGCGCGTCACCGGACTCGCTGTCTCACCATCATCTCCAACCCGGAAC GACCAAGCGATTTCAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP
Sequences:
>Translated_48_residues MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP >Mature_48_residues MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5337; Mature: 5337
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQATGPDPPSQLSIVADAEHDKLPLPSLVRVLFRYERPEREPLSVPSP CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA