| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is mtaP [H]
Identifier: 221632843
GI number: 221632843
Start: 818553
End: 819422
Strand: Reverse
Name: mtaP [H]
Synonym: trd_0837
Alternate gene names: 221632843
Gene position: 819422-818553 (Counterclockwise)
Preceding gene: 221632851
Following gene: 221632842
Centisome position: 40.91
GC content: 61.03
Gene sequence:
>870_bases ATGGACGCTGAACTCGGTGTGATCGGTGGAAGCGGTCTCTATCGCATGCCGGAGCTCACCGATGTGGAGGAGATCGCCAT CGAGACCCCCTTCGGTCGACCGAGCGATACCATCACGCTGGGAACACTCCATGGGATGCGCGTCGCTTTCATACCGCGAC ACGGTCGTGCGCACCAGCACAGTCCGAGCAATGTACCAGCCAGGGCCAATTTTTGGGCACTCAAGTCGCTCGGAGTGCAG TGGGTCGTCTCCGTGAGTGCTGTCGGCAGTCTCCGCGAGGAGATCGCACCACTCGATTTCGTCGTACCCGATCAAGTCGT CGACCGAACTGTCCGGCGGCCTCGCTCGTTTTTCGATGAGAGCGGCCTGGTTGTCCATGTCACGCTGGATGAGCCGTTTT GCCCGGAACTGCGGTGGGCACTCACCCAAGCAGCGATCGCGGCCGGCGTGCGCGTCCACGACCGAGGGACTTATATCTGC ATCGAAGGCCCACAGTTCTCGACGCGCGCAGAATCGAACCTGTACCGTTCGTGGGGACTGGACATCATCGGTATGACGGC GATGCCGGAGGTTCGTCTGGCTCGGGAGGCAGAACTCTGTTTCGCGCTGCTCGCACTGGTGACAGACTACGATGTGTGGC ATGCCGAAGAAGAACCGGTGAGCGTATCGGTCGTGTTGGAGCGCTTGCATCAGAACGTCCAAGCAGCGCAACGTGCCCTC AGCGCACTGATCGAGTACCTGCGAGCACTACCAGGGCGATGCGGCTGTCGCACTGCGCTCCAGCATGCGATCGTGACCGA CCCAGCTGCGATTTCCCCCGAAATACGGCAGCGATTCTCGCTTCTTCTCGGCAAGTACCTGCCAGGGTGA
Upstream 100 bases:
>100_bases GACGCAACTCGATGTTATCCTGCACATGCATCGAGCGCACGGCCTCCCAGCGAAGTGTAACGTGCGCCGTAGGACCGACT GAACGAGGGAAGGACAACTG
Downstream 100 bases:
>100_bases TCGATGAAGCGAGGAGGTCCGGTAGTCCGCTGGCTCGAGCTCCAACTCCTCGTGGTACCGGCGACCGCCGCTCTCGTGGG CCTGCTGACGATCTACCTCG
Product: methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDAELGVIGGSGLYRMPELTDVEEIAIETPFGRPSDTITLGTLHGMRVAFIPRHGRAHQHSPSNVPARANFWALKSLGVQ WVVSVSAVGSLREEIAPLDFVVPDQVVDRTVRRPRSFFDESGLVVHVTLDEPFCPELRWALTQAAIAAGVRVHDRGTYIC IEGPQFSTRAESNLYRSWGLDIIGMTAMPEVRLAREAELCFALLALVTDYDVWHAEEEPVSVSVVLERLHQNVQAAQRAL SALIEYLRALPGRCGCRTALQHAIVTDPAAISPEIRQRFSLLLGKYLPG
Sequences:
>Translated_289_residues MDAELGVIGGSGLYRMPELTDVEEIAIETPFGRPSDTITLGTLHGMRVAFIPRHGRAHQHSPSNVPARANFWALKSLGVQ WVVSVSAVGSLREEIAPLDFVVPDQVVDRTVRRPRSFFDESGLVVHVTLDEPFCPELRWALTQAAIAAGVRVHDRGTYIC IEGPQFSTRAESNLYRSWGLDIIGMTAMPEVRLAREAELCFALLALVTDYDVWHAEEEPVSVSVVLERLHQNVQAAQRAL SALIEYLRALPGRCGCRTALQHAIVTDPAAISPEIRQRFSLLLGKYLPG >Mature_289_residues MDAELGVIGGSGLYRMPELTDVEEIAIETPFGRPSDTITLGTLHGMRVAFIPRHGRAHQHSPSNVPARANFWALKSLGVQ WVVSVSAVGSLREEIAPLDFVVPDQVVDRTVRRPRSFFDESGLVVHVTLDEPFCPELRWALTQAAIAAGVRVHDRGTYIC IEGPQFSTRAESNLYRSWGLDIIGMTAMPEVRLAREAELCFALLALVTDYDVWHAEEEPVSVSVVLERLHQNVQAAQRAL SALIEYLRALPGRCGCRTALQHAIVTDPAAISPEIRQRFSLLLGKYLPG
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=245, Percent_Identity=46.530612244898, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71980569, Length=238, Percent_Identity=41.5966386554622, Blast_Score=190, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6323045, Length=303, Percent_Identity=39.2739273927393, Blast_Score=201, Evalue=9e-53, Organism=Drosophila melanogaster, GI20130079, Length=241, Percent_Identity=41.9087136929461, Blast_Score=197, Evalue=6e-51, Organism=Drosophila melanogaster, GI221459247, Length=250, Percent_Identity=36, Blast_Score=171, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 31898; Mature: 31898
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAELGVIGGSGLYRMPELTDVEEIAIETPFGRPSDTITLGTLHGMRVAFIPRHGRAHQH CCCCEEEECCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCC SPSNVPARANFWALKSLGVQWVVSVSAVGSLREEIAPLDFVVPDQVVDRTVRRPRSFFDE CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHCC SGLVVHVTLDEPFCPELRWALTQAAIAAGVRVHDRGTYICIEGPQFSTRAESNLYRSWGL CCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCHHHHHHHHHCCC DIIGMTAMPEVRLAREAELCFALLALVTDYDVWHAEEEPVSVSVVLERLHQNVQAAQRAL CEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH SALIEYLRALPGRCGCRTALQHAIVTDPAAISPEIRQRFSLLLGKYLPG HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAELGVIGGSGLYRMPELTDVEEIAIETPFGRPSDTITLGTLHGMRVAFIPRHGRAHQH CCCCEEEECCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEEEECCEEEEEEECCCCCCCC SPSNVPARANFWALKSLGVQWVVSVSAVGSLREEIAPLDFVVPDQVVDRTVRRPRSFFDE CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHCC SGLVVHVTLDEPFCPELRWALTQAAIAAGVRVHDRGTYICIEGPQFSTRAESNLYRSWGL CCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCHHHHHHHHHCCC DIIGMTAMPEVRLAREAELCFALLALVTDYDVWHAEEEPVSVSVVLERLHQNVQAAQRAL CEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH SALIEYLRALPGRCGCRTALQHAIVTDPAAISPEIRQRFSLLLGKYLPG HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA