Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632840

Identifier: 221632840

GI number: 221632840

Start: 815165

End: 815542

Strand: Reverse

Name: 221632840

Synonym: trd_0834

Alternate gene names: NA

Gene position: 815542-815165 (Counterclockwise)

Preceding gene: 221632841

Following gene: 221632839

Centisome position: 40.72

GC content: 63.49

Gene sequence:

>378_bases
ATGCCGGTCGTCGTGACGCGCCGCGAATTCGAGCACATGGTCCACGATGCGCTGAGCTGCCTGCCTGAGGAGTTTCGACG
AGCTTTGGACAACGTCGCGCTGGTGATCGAGCGCGAACCGCGGCGGCATCACCGCCGGCTGGCCGGGGGGCGCACCGGTA
CGCTCTTCGGGCTTTATGAGGGGGTGCCACTGACGCAGCGGACGACAGGATACGGTCTCGTACCACCGGACGTGATCACG
CTCTTTCAAGGCCCCATCTGCCGGGCAGCCCGTGATCGACGCGATGTTGCCCGCATCGTTCGCGAGACGGTTCTGCATGA
GCTCGCACACTACTTCGGAATCGATGACCAGCGATTGCTGGAAATCGGGCGATACTGA

Upstream 100 bases:

>100_bases
ATCGGTAGAACGCTTTTGGCAGCGGCGGTCGGGACGGGATGACGCTCACCGGTGAGGCCGATTCTGGTATACTTGTTCGG
GTTTAGTGACAGGGTGTCGC

Downstream 100 bases:

>100_bases
GAGGTGAGGAGCGTGAAATCTGCACCATCGCGCTCGCTCCGAGAACCCGCACCAGCCGGAGTGATCGATACCATCGGGAC
GGCGTTCACGATTCTCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPVVVTRREFEHMVHDALSCLPEEFRRALDNVALVIEREPRRHHRRLAGGRTGTLFGLYEGVPLTQRTTGYGLVPPDVIT
LFQGPICRAARDRRDVARIVRETVLHELAHYFGIDDQRLLEIGRY

Sequences:

>Translated_125_residues
MPVVVTRREFEHMVHDALSCLPEEFRRALDNVALVIEREPRRHHRRLAGGRTGTLFGLYEGVPLTQRTTGYGLVPPDVIT
LFQGPICRAARDRRDVARIVRETVLHELAHYFGIDDQRLLEIGRY
>Mature_124_residues
PVVVTRREFEHMVHDALSCLPEEFRRALDNVALVIEREPRRHHRRLAGGRTGTLFGLYEGVPLTQRTTGYGLVPPDVITL
FQGPICRAARDRRDVARIVRETVLHELAHYFGIDDQRLLEIGRY

Specific function: Unknown

COG id: COG3824

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14429; Mature: 14298

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVVTRREFEHMVHDALSCLPEEFRRALDNVALVIEREPRRHHRRLAGGRTGTLFGLYE
CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCCHHHHHCC
GVPLTQRTTGYGLVPPDVITLFQGPICRAARDRRDVARIVRETVLHELAHYFGIDDQRLL
CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EIGRY
HHCCC
>Mature Secondary Structure 
PVVVTRREFEHMVHDALSCLPEEFRRALDNVALVIEREPRRHHRRLAGGRTGTLFGLYE
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCCHHHHHCC
GVPLTQRTTGYGLVPPDVITLFQGPICRAARDRRDVARIVRETVLHELAHYFGIDDQRLL
CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EIGRY
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA