| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221632791
Identifier: 221632791
GI number: 221632791
Start: 771186
End: 771440
Strand: Reverse
Name: 221632791
Synonym: trd_0784
Alternate gene names: NA
Gene position: 771440-771186 (Counterclockwise)
Preceding gene: 221632793
Following gene: 221632782
Centisome position: 38.51
GC content: 60.0
Gene sequence:
>255_bases ATGCACCAAGTCATCGCGCATGTCCTGAACGACGACCCGTTCGTCGCCGAAGTCGATAAACCCCCTGATCCGCAACACCA GTCCGTGTTCCTACGGAAGCCGCGGCGATTCGACGGCGAACGCTTGACCACCACCGCTCAGAGAGTGATCACTGTGCTGT ACCCGTGGCATCGCATCACATACATCGAACTCCTGGACGAGGGGAGCGACCAGCGTCCAAGTCAGCTCGTCACTGTCGTC CGCGACGAGCACTGA
Upstream 100 bases:
>100_bases TCCCGACACCACTCGAGGGCCGAGGCGTCTCCTATCTTGGAACCTCGGACAGTCGGATCTCAGTTATACGGCTCGCACTG GATTCGAGGAGGAACGAAGC
Downstream 100 bases:
>100_bases GATTCACTCACGAACGCGGCTCGTCTCCCGAAACCTCGGCAGTCGCTTCGCGCGTCGCGGTTCGGAACTCTCGGATCGTG CGTCCGATGGCACTACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MHQVIAHVLNDDPFVAEVDKPPDPQHQSVFLRKPRRFDGERLTTTAQRVITVLYPWHRITYIELLDEGSDQRPSQLVTVV RDEH
Sequences:
>Translated_84_residues MHQVIAHVLNDDPFVAEVDKPPDPQHQSVFLRKPRRFDGERLTTTAQRVITVLYPWHRITYIELLDEGSDQRPSQLVTVV RDEH >Mature_84_residues MHQVIAHVLNDDPFVAEVDKPPDPQHQSVFLRKPRRFDGERLTTTAQRVITVLYPWHRITYIELLDEGSDQRPSQLVTVV RDEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9855; Mature: 9855
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQVIAHVLNDDPFVAEVDKPPDPQHQSVFLRKPRRFDGERLTTTAQRVITVLYPWHRIT CHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHEE YIELLDEGSDQRPSQLVTVVRDEH EEEEECCCCCCCCCCEEEEEECCC >Mature Secondary Structure MHQVIAHVLNDDPFVAEVDKPPDPQHQSVFLRKPRRFDGERLTTTAQRVITVLYPWHRIT CHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHEE YIELLDEGSDQRPSQLVTVVRDEH EEEEECCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA