Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is cphA [H]

Identifier: 221632748

GI number: 221632748

Start: 729290

End: 730321

Strand: Reverse

Name: cphA [H]

Synonym: trd_0739

Alternate gene names: 221632748

Gene position: 730321-729290 (Counterclockwise)

Preceding gene: 221632749

Following gene: 221632744

Centisome position: 36.46

GC content: 61.53

Gene sequence:

>1032_bases
GTGGTGGCGACTGTCGGGCTCCCTGCGGCGATCTACCGCGCAGGGGCAGTCACCACGCTCTGCGGCAATGACGACAGCTG
TCTTCTCGCCCCCGCGACCCGGTACGCCGCACGAGCCCACGAGATCGTCGCGCGGGCGATCCACCCGCACGGATTCATCG
TCCTCAACGCTGATGATCCCGACGTCCTCGGACTCGCCGAGGAAAGTCTGGCTCGCGTCATTTTCTTCGCACTGCATCCG
GAGAACCCCGTGCTGCGCCGCCAGCGTGATGCTCGGAAGCCGGCTATCTGGTACGACGACGGTGTCATCGTCGCCAACCG
CGCACTGTACGATTACCAGGCACTTTTCGCATGGGACGCGCAGACAACGGAGAGTGACGCTTTCTCTGCCCCATCGGCTT
TTCTCGAGCGAGTAGAGACCCGCACCGAACCGGACGATATTCCTGTCATCGCTGTTCGCGAGGCTCCAATCACGCTAGGC
GGCGCACTGCTCTTTCAGGTTCAGAATGTGCTCTGCGCGACCGCATTGGCACTCGGACTCGGCATCTCCCTTACAGCGAT
TCGATCGACCTTGCGCACCTTCCTTCCGACGCACGACCTTCTCCCTGGTTCGTGCAACCTCGTCTTCCTCCGCGACCTGA
TCGTTCTCATCGATGGTGCACGGGATCTTTGGACATTACGCACGCTCCTGCGTTGCGTTCGCCAAAGCACCCCGCACAAG
GTATTCGTGGTGACGCATGGCTTCCCCTGGTTGAGTCAGGAGGATCTCCGCGAAGTAGGACGAATACTGGGTAGAGTCAC
CGGGATGATTCTGATCTCGGAGCCTTTGGGAGACGAGCGACTCGCTGCCTTCCGTGAGGGAGTCGTCGAAAACGTTCTGC
CGCCGGTAATCGTTACCCAACCCGATCTCCCTCAGGCGCTCCAGACAGTGCTCACGCTGGCCCGCCCCGGCGACCTGTGC
CTCGTCCTCGCCAGCGACCCGTTGAAGACAGGAGAGATCGTACGACGGATCATCGATGGGAACGGGACATGA

Upstream 100 bases:

>100_bases
TGAACGACAGCTGGAAGGAGAACTCCAGCCGTGAACGAGCGTCGTTCAGGCGCTCCGTACTGGCGATCTCGACCTGGCGA
TCCAGGAACTGGAAGCGCCT

Downstream 100 bases:

>100_bases
GTTGCTTCTTCAAGCCGCCGATGCGAGTTCGAGGGCTGTTCGTTCCTCGACCCACACGCTCCCCGCTCCCAGCGTTGCCT
CGATGACCCGAGCGAAGTCC

Product: putative cyanophycin synthetase

Products: NA

Alternate protein names: Cyanophycin synthase [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MVATVGLPAAIYRAGAVTTLCGNDDSCLLAPATRYAARAHEIVARAIHPHGFIVLNADDPDVLGLAEESLARVIFFALHP
ENPVLRRQRDARKPAIWYDDGVIVANRALYDYQALFAWDAQTTESDAFSAPSAFLERVETRTEPDDIPVIAVREAPITLG
GALLFQVQNVLCATALALGLGISLTAIRSTLRTFLPTHDLLPGSCNLVFLRDLIVLIDGARDLWTLRTLLRCVRQSTPHK
VFVVTHGFPWLSQEDLREVGRILGRVTGMILISEPLGDERLAAFREGVVENVLPPVIVTQPDLPQALQTVLTLARPGDLC
LVLASDPLKTGEIVRRIIDGNGT

Sequences:

>Translated_343_residues
MVATVGLPAAIYRAGAVTTLCGNDDSCLLAPATRYAARAHEIVARAIHPHGFIVLNADDPDVLGLAEESLARVIFFALHP
ENPVLRRQRDARKPAIWYDDGVIVANRALYDYQALFAWDAQTTESDAFSAPSAFLERVETRTEPDDIPVIAVREAPITLG
GALLFQVQNVLCATALALGLGISLTAIRSTLRTFLPTHDLLPGSCNLVFLRDLIVLIDGARDLWTLRTLLRCVRQSTPHK
VFVVTHGFPWLSQEDLREVGRILGRVTGMILISEPLGDERLAAFREGVVENVLPPVIVTQPDLPQALQTVLTLARPGDLC
LVLASDPLKTGEIVRRIIDGNGT
>Mature_343_residues
MVATVGLPAAIYRAGAVTTLCGNDDSCLLAPATRYAARAHEIVARAIHPHGFIVLNADDPDVLGLAEESLARVIFFALHP
ENPVLRRQRDARKPAIWYDDGVIVANRALYDYQALFAWDAQTTESDAFSAPSAFLERVETRTEPDDIPVIAVREAPITLG
GALLFQVQNVLCATALALGLGISLTAIRSTLRTFLPTHDLLPGSCNLVFLRDLIVLIDGARDLWTLRTLLRCVRQSTPHK
VFVVTHGFPWLSQEDLREVGRILGRVTGMILISEPLGDERLAAFREGVVENVLPPVIVTQPDLPQALQTVLTLARPGDLC
LVLASDPLKTGEIVRRIIDGNGT

Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]

COG id: COG0769

COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR011810
- InterPro:   IPR004101
- InterPro:   IPR013221 [H]

Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]

EC number: =6.3.2.29; =6.3.2.30 [H]

Molecular weight: Translated: 37368; Mature: 37368

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATVGLPAAIYRAGAVTTLCGNDDSCLLAPATRYAARAHEIVARAIHPHGFIVLNADDP
CEEECCCCHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
DVLGLAEESLARVIFFALHPENPVLRRQRDARKPAIWYDDGVIVANRALYDYQALFAWDA
CEECHHHHHHHHEEEEEECCCCCHHHHHHHCCCCEEEECCCEEEECCHHHHHHEEEEECC
QTTESDAFSAPSAFLERVETRTEPDDIPVIAVREAPITLGGALLFQVQNVLCATALALGL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
GISLTAIRSTLRTFLPTHDLLPGSCNLVFLRDLIVLIDGARDLWTLRTLLRCVRQSTPHK
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE
VFVVTHGFPWLSQEDLREVGRILGRVTGMILISEPLGDERLAAFREGVVENVLPPVIVTQ
EEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
PDLPQALQTVLTLARPGDLCLVLASDPLKTGEIVRRIIDGNGT
CCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MVATVGLPAAIYRAGAVTTLCGNDDSCLLAPATRYAARAHEIVARAIHPHGFIVLNADDP
CEEECCCCHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
DVLGLAEESLARVIFFALHPENPVLRRQRDARKPAIWYDDGVIVANRALYDYQALFAWDA
CEECHHHHHHHHEEEEEECCCCCHHHHHHHCCCCEEEECCCEEEECCHHHHHHEEEEECC
QTTESDAFSAPSAFLERVETRTEPDDIPVIAVREAPITLGGALLFQVQNVLCATALALGL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
GISLTAIRSTLRTFLPTHDLLPGSCNLVFLRDLIVLIDGARDLWTLRTLLRCVRQSTPHK
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCE
VFVVTHGFPWLSQEDLREVGRILGRVTGMILISEPLGDERLAAFREGVVENVLPPVIVTQ
EEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
PDLPQALQTVLTLARPGDLCLVLASDPLKTGEIVRRIIDGNGT
CCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9652408 [H]