The gene/protein map for NC_011959 is currently unavailable.
Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is ybbP [H]

Identifier: 221632700

GI number: 221632700

Start: 678006

End: 678920

Strand: Reverse

Name: ybbP [H]

Synonym: trd_0688

Alternate gene names: 221632700

Gene position: 678920-678006 (Counterclockwise)

Preceding gene: 221632701

Following gene: 221632699

Centisome position: 33.9

GC content: 60.77

Gene sequence:

>915_bases
ATGCCCGAGCTACCCTGGATTTTCACCCGCATCGATCTGCGGGCCCTGGTGGATATACTGTCTGTGACCCTCATTTTCTA
TTGGCTCTTGTGGGTCATCCAGGGAACGAGAGCCGCCCAGCTCGTCCGTGGTCTCGTCATTTTCGTTATCCTCGTGGTCG
GCGCAGCGAACCTCTTCCATCTCCAGGCGTTGAACTGGCTTTTGAGCCAGGCACTCCCAGCGCTCATCGTCGCGATACCG
GTGGTTTTCCAGCCCGAGCTGCGCCGCGCACTCGAGCGGCTCGGGCATACTGGGGCTTGGCTACGCGCCCCTTTAGGTAG
TCACGAACCGCAGACGGAGGAAACGATCGAGGAGATTACCAAGGCTGTCGCGCAGTTGGCCCGGCTCCATTATGGTGCCC
TCATCGTCATCGAGCGTGAGACGGGTCTTCAAGACTACGCGGATCGTGGCATCCCCCTCGATGCGGCCCTCACACAACAA
CTCTTGGTCAACATCTTCTTCCCGAACTCGCCGCTGCACGACGGAGCGGTTATCATCCGTGGCAACCGGATACTCGCTGC
CGGGTGTGTTCTGCCCCTCAGCGAGAACTTGACCGATCCCCAACTCGGCACACGCCACCGCGCCGGCGTCGGCATTACCG
AGGAGTCGGATGCCATCGCGATCATCGTCTCGGAGGAGAGTGGACAGATTTCTCTCGCCGTGAATGGCCGGTTGTATCGA
AACATCGATATCGAACGCCTTCGCCGTGCCTTGCGCGCACTCCTCCATGTCGAAGGAACCGGCCGACGACGTCTCTCGAC
CTTGCTAGCGTCATCCGCGAGCGGTACAGACGCTCCCGATGCGAAACGAAGAAGGGAACCGACCGGTGCAACGACGCGCG
AGGATACTCCGGCCTCTCCGTCACGCATGGGCTAG

Upstream 100 bases:

>100_bases
CGCGCTACCTCTTCGCCCGCACTGACGCGGGGGCCGCGAGCGCACCAGGTGTTAGAATTCGATCAGCGCGCTGGAGTAGC
GGCTAACAGGGACGAGCGCG

Downstream 100 bases:

>100_bases
CGTGCGACCATCGCTGCGTCGGGAGACTGTCGCTCGCCTCGCGCTCGCTTTCGTTCTCGCCTTCGGGCTCTGGGCTTGGG
TCGAAGCGACGAACGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPELPWIFTRIDLRALVDILSVTLIFYWLLWVIQGTRAAQLVRGLVIFVILVVGAANLFHLQALNWLLSQALPALIVAIP
VVFQPELRRALERLGHTGAWLRAPLGSHEPQTEETIEEITKAVAQLARLHYGALIVIERETGLQDYADRGIPLDAALTQQ
LLVNIFFPNSPLHDGAVIIRGNRILAAGCVLPLSENLTDPQLGTRHRAGVGITEESDAIAIIVSEESGQISLAVNGRLYR
NIDIERLRRALRALLHVEGTGRRRLSTLLASSASGTDAPDAKRRREPTGATTREDTPASPSRMG

Sequences:

>Translated_304_residues
MPELPWIFTRIDLRALVDILSVTLIFYWLLWVIQGTRAAQLVRGLVIFVILVVGAANLFHLQALNWLLSQALPALIVAIP
VVFQPELRRALERLGHTGAWLRAPLGSHEPQTEETIEEITKAVAQLARLHYGALIVIERETGLQDYADRGIPLDAALTQQ
LLVNIFFPNSPLHDGAVIIRGNRILAAGCVLPLSENLTDPQLGTRHRAGVGITEESDAIAIIVSEESGQISLAVNGRLYR
NIDIERLRRALRALLHVEGTGRRRLSTLLASSASGTDAPDAKRRREPTGATTREDTPASPSRMG
>Mature_303_residues
PELPWIFTRIDLRALVDILSVTLIFYWLLWVIQGTRAAQLVRGLVIFVILVVGAANLFHLQALNWLLSQALPALIVAIPV
VFQPELRRALERLGHTGAWLRAPLGSHEPQTEETIEEITKAVAQLARLHYGALIVIERETGLQDYADRGIPLDAALTQQL
LVNIFFPNSPLHDGAVIIRGNRILAAGCVLPLSENLTDPQLGTRHRAGVGITEESDAIAIIVSEESGQISLAVNGRLYRN
IDIERLRRALRALLHVEGTGRRRLSTLLASSASGTDAPDAKRRREPTGATTREDTPASPSRMG

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 33385; Mature: 33254

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELPWIFTRIDLRALVDILSVTLIFYWLLWVIQGTRAAQLVRGLVIFVILVVGAANLFH
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQALNWLLSQALPALIVAIPVVFQPELRRALERLGHTGAWLRAPLGSHEPQTEETIEEIT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
KAVAQLARLHYGALIVIERETGLQDYADRGIPLDAALTQQLLVNIFFPNSPLHDGAVIIR
HHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEE
GNRILAAGCVLPLSENLTDPQLGTRHRAGVGITEESDAIAIIVSEESGQISLAVNGRLYR
CCEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEEE
NIDIERLRRALRALLHVEGTGRRRLSTLLASSASGTDAPDAKRRREPTGATTREDTPASP
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
SRMG
CCCC
>Mature Secondary Structure 
PELPWIFTRIDLRALVDILSVTLIFYWLLWVIQGTRAAQLVRGLVIFVILVVGAANLFH
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQALNWLLSQALPALIVAIPVVFQPELRRALERLGHTGAWLRAPLGSHEPQTEETIEEIT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
KAVAQLARLHYGALIVIERETGLQDYADRGIPLDAALTQQLLVNIFFPNSPLHDGAVIIR
HHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEE
GNRILAAGCVLPLSENLTDPQLGTRHRAGVGITEESDAIAIIVSEESGQISLAVNGRLYR
CCEEEEECEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEEE
NIDIERLRRALRALLHVEGTGRRRLSTLLASSASGTDAPDAKRRREPTGATTREDTPASP
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
SRMG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]